RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 LTFP02788 710 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 SPINK2P20155 84 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 PRKCHP24723 683 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 HOXD9P28356 352 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 CD6P30203 668 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 SLC11A2P49281 568 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 SGSHP51688 502 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 ZNF252P-AS1Q0IIN9 211 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 STILQ15468 1287 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 TPD52L1Q16890 204 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 TMEM215Q68D42 235 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 GJB7Q6PEY0 223 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 CHST9Q7L1S5 443 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 UNC45BQ8IWX7 931 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 HDDC3Q8N4P3 179 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 IRGQQ8WZA9 623 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 PRCCQ92733 491 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 CD248Q9HCU0 757 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 ACP6Q9NPH0 428 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 EVLQ9UI08 416 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 NAALADL1Q9UQQ1 740 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 CACNA1BQ00975 2339 aa10.66□□□□□ -0.7
CTNNA1-235ENST00000522730 MAP1BP46821 2468 aaKnown RBP10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 KCNJ18B7U540 433 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 NPC1O15118 1278 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 PMM2O15305 246 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 ACSL4O60488 711 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 KRT37O76014 449 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 FBXO21O94952 628 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 SERPINF2P08697 491 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 GNSP15586 552 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 POLR2EP19388 210 aaKnown RBP10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 HLA-FP30511 346 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 DPP6P42658 865 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 TPMTP51580 245 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 UBE2HP62256 183 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 APBA1Q02410 837 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 GCNT1Q02742 428 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 E2F5Q15329 346 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 WDR45BQ5MNZ6 344 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 SLC23A3Q6PIS1 610 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 CFAP52Q8N1V2 620 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 CARNMT1Q8N4J0 409 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 GANCQ8TET4 914 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 SNX19Q92543 992 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 ZNF419Q96HQ0 510 aaPredicted RBP10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 HSFY1Q96LI6 401 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 SLC32A1Q9H598 525 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 ITM2CQ9NQX7 267 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 KIAA1468Q9P260 1216 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 GGA2Q9UJY4 613 aa10.65□□□□□ -0.7
CTNNA1-235ENST00000522730 SYNJ2BP-COX16A0A087WUM0 186 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 SPAARA0A1B0GVQ0 90 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 FAM170AA1A519 330 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 ARHGAP33O14559 1287 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 MED7O43513 233 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 OPHN1O60890 802 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 TOP3BO95985 862 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 FYNP06241 537 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 SYPP08247 313 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 PABPC1P11940 636 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 CEACAM1P13688 526 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 SLC9A1P19634 815 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 PTMSP20962 102 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 PMLP29590 882 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 OXTRP30559 389 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 SLC6A4P31645 630 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 CD70P32970 193 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 GPD2P43304 727 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 MTIF2P46199 727 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 NUMBP49757 651 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 ZNF132P52740 706 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 EIF4HQ15056 248 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 ST3GAL2Q16842 350 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 PIK3R6Q5UE93 754 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 SYPL2Q5VXT5 272 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 NUGGCQ68CJ6 796 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 MBLAC2Q68D91 279 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 MSANTD2Q6P1R3 559 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 CCDC117Q8IWD4 279 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 FAM217AQ8IXS0 508 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 ZCCHC9Q8N567 271 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 MINDY1Q8N5J2 469 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 DQX1Q8TE96 717 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 ZNF606Q8WXB4 792 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 FOXJ1Q92949 421 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 DDX50Q9BQ39 737 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 NUP58Q9BVL2 599 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 MTG2Q9H4K7 406 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 WSB2Q9NYS7 404 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 COX16Q9P0S2 106 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 RWDD2AQ9UIY3 292 aa10.64□□□□□ -0.71
CTNNA1-235ENST00000522730 PI4KAP42356 2102 aa10.63□□□□□ -0.71
CTNNA1-235ENST00000522730 TYW5A2RUC4 315 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-235ENST00000522730 LATS1O95835 1130 aa10.63□□□□□ -0.71
CTNNA1-235ENST00000522730 ATP5BP06576 529 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-235ENST00000522730 CSRP1P21291 193 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-235ENST00000522730 GNA15P30679 374 aa10.63□□□□□ -0.71
CTNNA1-235ENST00000522730 HOXD12P35452 270 aa10.63□□□□□ -0.71
CTNNA1-235ENST00000522730 ACADSBP45954 432 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms