RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 TXKP42681 527 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 SLC15A1P46059 708 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 NT5C2P49902 561 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 ZNF135P52742 658 aaPredicted RBP4.25□□□□□ -1.73
SKP1-209ENST00000522552 UFM1P61960 85 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 SGCGQ13326 291 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 PTK6Q13882 451 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 RCN2Q14257 317 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 CLCA4Q14CN2 919 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 MEP1BQ16820 701 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 SLC9B1Q4ZJI4 515 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 TOR1AIP1Q5JTV8 583 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 UBAP2Q5T6F2 1119 aaKnown RBP4.25□□□□□ -1.73
SKP1-209ENST00000522552 CACHD1Q5VU97 1274 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 MEX3BQ6ZN04 569 aaKnown RBP4.25□□□□□ -1.73
SKP1-209ENST00000522552 TAS1R1Q7RTX1 841 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 USP37Q86T82 979 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 TMEM110Q86TL2 294 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 CABP7Q86V35 215 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 GAS2L3Q86XJ1 694 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 PDSS2Q86YH6 399 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.25□□□□□ -1.732e-6■■■□□ 18.1
SKP1-209ENST00000522552 SYCP3Q8IZU3 236 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 TMEM130Q8N3G9 435 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 ZNF366Q8N895 744 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 TMEM116Q8NCL8 245 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 DNERQ8NFT8 737 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 RFWD2Q8NHY2 731 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 CTCFLQ8NI51 663 aaPredicted RBP4.25□□□□□ -1.73
SKP1-209ENST00000522552 POMGNT1Q8WZA1 660 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 INTS12Q96CB8 462 aaKnown RBP4.25□□□□□ -1.73
SKP1-209ENST00000522552 PPP1R10Q96QC0 940 aaKnown RBP4.25□□□□□ -1.73
SKP1-209ENST00000522552 MYOCQ99972 504 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 MESP1Q9BRJ9 268 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 PACSIN1Q9BY11 444 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 ZNF552Q9H707 407 aaPredicted RBP4.25□□□□□ -1.73
SKP1-209ENST00000522552 GPR35Q9HC97 309 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 SPATS2LQ9NUQ6 558 aaKnown RBP4.25□□□□□ -1.73
SKP1-209ENST00000522552 ANO10Q9NW15 660 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 SPATA6Q9NWH7 488 aaPredicted RBP4.25□□□□□ -1.73
SKP1-209ENST00000522552 FBXO34Q9NWN3 711 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 CHCHD3Q9NX63 227 aaKnown RBP4.25□□□□□ -1.73
SKP1-209ENST00000522552 SH3BP4Q9P0V3 963 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 HCN3Q9P1Z3 774 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 RBPJLQ9UBG7 517 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 FETUBQ9UGM5 382 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 NFU1Q9UMS0 254 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 SLC45A2Q9UMX9 530 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 EXOC7Q9UPT5 735 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 U3KQE9 123 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 A0A1W2PQ27 194 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 A0A1W2PQ64 194 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 A0A1W2PQC6 194 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 A0A1W2PQD8 194 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 ARHGEF37A1IGU5 675 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 A8MZ25 164 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 RIPK2O43353 540 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 NOL3O60936 208 aaKnown RBP4.24□□□□□ -1.73
SKP1-209ENST00000522552 LMNAP02545 664 aaKnown RBP4.24□□□□□ -1.73
SKP1-209ENST00000522552 ESR1P03372 595 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 MPOP05164 745 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 URODP06132 367 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 ABCB1P08183 1280 aaPredicted RBP4.24□□□□□ -1.73
SKP1-209ENST00000522552 IL2RBP14784 551 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 FERP16591 822 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 AVPR2P30518 371 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 PTPN7P35236 360 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 ARL1P40616 181 aaPredicted RBP4.24□□□□□ -1.73
SKP1-209ENST00000522552 IL15P40933 162 aaPredicted RBP4.24□□□□□ -1.73
SKP1-209ENST00000522552 PNPLA4P41247 253 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 CCR10P46092 362 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 EIF3BP55884 814 aaKnown RBP4.24□□□□□ -1.73
SKP1-209ENST00000522552 OLR1P78380 273 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 PRAMEP78395 509 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 IL13RA1P78552 427 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 ZBTB16Q05516 673 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 SCN1BQ07699 218 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 SNTB1Q13884 538 aaKnown RBP4.24□□□□□ -1.73
SKP1-209ENST00000522552 CSHL1Q14406 222 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 NFKBIBQ15653 356 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 RSPO4Q2I0M5 234 aaPredicted RBP4.24□□□□□ -1.73
SKP1-209ENST00000522552 CRY2Q49AN0 593 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 AMOTQ4VCS5 1084 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 CEP55Q53EZ4 464 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 GKAP1Q5VSY0 366 aaPredicted RBP4.24□□□□□ -1.73
SKP1-209ENST00000522552 MSANTD2Q6P1R3 559 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 UBE3BQ7Z3V4 1068 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 KBTBD6Q86V97 674 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 WDR63Q8IWG1 891 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 SPACA3Q8IXA5 215 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 BCL6BQ8N143 479 aaPredicted RBP4.24□□□□□ -1.73
SKP1-209ENST00000522552 HDDC3Q8N4P3 179 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 NETO2Q8NC67 525 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 FAM46DQ8NEK8 389 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 BRSK1Q8TDC3 778 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 DDX17Q92841 729 aaKnown RBP4.24□□□□□ -1.73
SKP1-209ENST00000522552 SAT2Q96F10 170 aaPredicted RBP4.24□□□□□ -1.73
SKP1-209ENST00000522552 FAM46AQ96IP4 442 aaKnown RBP4.24□□□□□ -1.73
SKP1-209ENST00000522552 NLRP4Q96MN2 994 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms