RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 TBC1D14Q9P2M4 693 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 LCMT1Q9UIC8 334 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 FBXL21Q9UKT6 434 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 CA14Q9ULX7 337 aa15.89■□□□□ 0.13
LSM1-203ENST00000520755 PACSIN2Q9UNF0 486 aaPredicted RBP15.89■□□□□ 0.13
LSM1-203ENST00000520755 CHD5Q8TDI0 1954 aa15.88■□□□□ 0.13
LSM1-203ENST00000520755 TNFRSF10AO00220 468 aa15.88■□□□□ 0.13
LSM1-203ENST00000520755 ARNTLO00327 626 aa15.88■□□□□ 0.13
LSM1-203ENST00000520755 MOCS2O96007 188 aaPredicted RBP15.88■□□□□ 0.13
LSM1-203ENST00000520755 RUNX3Q13761 415 aa15.88■□□□□ 0.13
LSM1-203ENST00000520755 ZC3H12AQ5D1E8 599 aaKnown RBP15.88■□□□□ 0.13
LSM1-203ENST00000520755 NUGGCQ68CJ6 796 aa15.88■□□□□ 0.13
LSM1-203ENST00000520755 Q6ZNB5 142 aa15.88■□□□□ 0.13
LSM1-203ENST00000520755 TRIM58Q8NG06 486 aa15.88■□□□□ 0.13
LSM1-203ENST00000520755 KRT35Q92764 455 aa15.88■□□□□ 0.13
LSM1-203ENST00000520755 DNASE1L2Q92874 299 aa15.88■□□□□ 0.13
LSM1-203ENST00000520755 ATP2A3Q93084 1043 aa15.88■□□□□ 0.13
LSM1-203ENST00000520755 WDR24Q96S15 920 aa15.88■□□□□ 0.13
LSM1-203ENST00000520755 HPS4Q9NQG7 708 aa15.88■□□□□ 0.13
LSM1-203ENST00000520755 ARHGEF38Q9NXL2 777 aa15.88■□□□□ 0.13
LSM1-203ENST00000520755 PCSK1NQ9UHG2 260 aa15.88■□□□□ 0.13
LSM1-203ENST00000520755 XPO7Q9UIA9 1087 aaKnown RBP15.88■□□□□ 0.13
LSM1-203ENST00000520755 AGO1Q9UL18 857 aaKnown RBP15.88■□□□□ 0.13
LSM1-203ENST00000520755 USP18Q9UMW8 372 aa15.88■□□□□ 0.13
LSM1-203ENST00000520755 KCNU1A8MYU2 1149 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 SPOPO43791 374 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 RNF8O76064 485 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 NFATC1O95644 943 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 APOEP02649 317 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 ALADP13716 330 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 SLC1A1P43005 524 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 RING1Q06587 406 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 PPP2R5DQ14738 602 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 ITPRIPL2Q3MIP1 535 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 ZNF569Q5MCW4 686 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 ARTNQ5T4W7 220 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 IER5LQ5T953 404 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 SND1Q7KZF4 910 aaKnown RBP eCLIP15.87■□□□□ 0.13
LSM1-203ENST00000520755 UNC45BQ8IWX7 931 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 CPA6Q8N4T0 437 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 KIAA1958Q8N8K9 716 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 EDAQ92838 391 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 NTAN1Q96AB6 310 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 ALS2CR12Q96Q35 445 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 SNRNP25Q9BV90 132 aaKnown RBP15.87■□□□□ 0.13
LSM1-203ENST00000520755 MAGEB5Q9BZ81 275 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 HEBP1Q9NRV9 189 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 GPATCH2LQ9NWQ4 482 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 ZNF510Q9Y2H8 683 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 MUC3AQ02505 3323 aa15.87■□□□□ 0.13
LSM1-203ENST00000520755 OTOL1A6NHN0 477 aaPredicted RBP15.86■□□□□ 0.13
LSM1-203ENST00000520755 DDX3YO15523 660 aaKnown RBP15.86■□□□□ 0.13
LSM1-203ENST00000520755 KIF5CO60282 957 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 F9P00740 461 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 CCR1P32246 355 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 CTNNA1P35221 906 aaKnown RBP15.86■□□□□ 0.13
LSM1-203ENST00000520755 GJC1P36383 396 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 SOX9P48436 509 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 VCPP55072 806 aaKnown RBP15.86■□□□□ 0.13
LSM1-203ENST00000520755 SCAPQ12770 1279 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 CA9Q16790 459 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 SMTNL2Q2TAL5 461 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 ATP13A4Q4VNC1 1196 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 SLC44A4Q53GD3 710 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 BRMS1LQ5PSV4 323 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 MEI1Q5TIA1 1274 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 SCYL2Q6P3W7 929 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 PEX26Q7Z412 305 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 SYCE1Q8N0S2 351 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 OTUB2Q96DC9 234 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 HES6Q96HZ4 224 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 C16orf45Q96MC5 204 aaPredicted RBP15.86■□□□□ 0.13
LSM1-203ENST00000520755 TLR10Q9BXR5 811 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 TKTL2Q9H0I9 626 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 ECT2Q9H8V3 914 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 TRPV5Q9NQA5 729 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 KLHL11Q9NVR0 708 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.86■□□□□ 0.13
LSM1-203ENST00000520755 FZD10Q9ULW2 581 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 NYNRINQ9P2P1 1898 aaKnown RBP15.86■□□□□ 0.13
LSM1-203ENST00000520755 NCOR1O75376 2440 aa15.86■□□□□ 0.13
LSM1-203ENST00000520755 PSTPIP1O43586 416 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 PRPSAP2O60256 369 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 CYP17A1P05093 508 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 RARAP10276 462 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 SLC2A3P11169 496 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 CTNNA2P26232 953 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 GGCXP38435 758 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 SLC11A2P49281 568 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 SIGLEC14Q08ET2 396 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 DHCR24Q15392 516 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 MLF2Q15773 248 aaPredicted RBP15.85■□□□□ 0.13
LSM1-203ENST00000520755 KCNT1Q5JUK3 1230 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 LY6G5CQ5SRR4 150 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 PIK3R6Q5UE93 754 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 DCAF12L1Q5VU92 463 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 NADSYN1Q6IA69 706 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 TPGS1Q6ZTW0 290 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 POLNQ7Z5Q5 900 aa15.85■□□□□ 0.13
LSM1-203ENST00000520755 ADGRG2Q8IZP9 1017 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms