RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 C2CD4BA6NLJ0 364 aa22.8■■□□□ 1.24
VEGFA-217ENST00000518538 SIGLEC16A6NMB1 481 aa22.8■■□□□ 1.24
VEGFA-217ENST00000518538 CHURC1-FNTBB4DL54 471 aa22.8■■□□□ 1.24
VEGFA-217ENST00000518538 TRIM24O15164 1050 aa22.8■■□□□ 1.24
VEGFA-217ENST00000518538 ATG13O75143 517 aa22.8■■□□□ 1.24
VEGFA-217ENST00000518538 CISD3P0C7P0 127 aa22.8■■□□□ 1.24
VEGFA-217ENST00000518538 HOXD9P28356 352 aaPredicted RBP22.8■■□□□ 1.24
VEGFA-217ENST00000518538 CXCR3P49682 368 aa22.8■■□□□ 1.24
VEGFA-217ENST00000518538 ARID5BQ14865 1188 aa22.8■■□□□ 1.24
VEGFA-217ENST00000518538 BRMS1LQ5PSV4 323 aa22.8■■□□□ 1.24
VEGFA-217ENST00000518538 DNAJC24Q6P3W2 148 aa22.8■■□□□ 1.24
VEGFA-217ENST00000518538 SND1Q7KZF4 910 aaKnown RBP eCLIP22.8■■□□□ 1.247e-20■□□□□ 9.3
VEGFA-217ENST00000518538 MAML2Q8IZL2 1156 aaPredicted RBP22.8■■□□□ 1.24
VEGFA-217ENST00000518538 JOSD2Q8TAC2 188 aa22.8■■□□□ 1.24
VEGFA-217ENST00000518538 PRICKLE1Q96MT3 831 aaPredicted RBP22.8■■□□□ 1.24
VEGFA-217ENST00000518538 DNAJC7Q99615 494 aa22.8■■□□□ 1.24
VEGFA-217ENST00000518538 SLC2A11Q9BYW1 496 aa22.8■■□□□ 1.24
VEGFA-217ENST00000518538 FBXO4Q9UKT5 387 aa22.8■■□□□ 1.24
VEGFA-217ENST00000518538 SLC27A6Q9Y2P4 619 aa22.8■■□□□ 1.24
VEGFA-217ENST00000518538 PAXBP1Q9Y5B6 917 aa22.8■■□□□ 1.24
VEGFA-217ENST00000518538 RTN2O75298 545 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 GJB6O95452 261 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 PLEKP08567 350 aaPredicted RBP22.79■■□□□ 1.24
VEGFA-217ENST00000518538 PDGFRAP16234 1089 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 RRM1P23921 792 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 SDC4P31431 198 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 CXCL12P48061 93 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 SGSHP51688 502 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 SEC13P55735 322 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 MS4A13Q5J8X5 152 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 PKN3Q6P5Z2 889 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 CHSY1Q86X52 802 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 DRC7Q8IY82 874 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 HJURPQ8NCD3 748 aaPredicted RBP22.79■■□□□ 1.24
VEGFA-217ENST00000518538 OR8K1Q8NGG5 319 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 RPLP0P6Q8NHW5 317 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 USP33Q8TEY7 942 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 RXFP2Q8WXD0 754 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 WDCPQ9H6R7 721 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 ARHGEF38Q9NXL2 777 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 ADAMTS1Q9UHI8 967 aa22.79■■□□□ 1.24
VEGFA-217ENST00000518538 TYW5A2RUC4 315 aaKnown RBP22.78■■□□□ 1.24
VEGFA-217ENST00000518538 H0Y858 1186 aa22.78■■□□□ 1.24
VEGFA-217ENST00000518538 ENDOD1O94919 500 aa22.78■■□□□ 1.24
VEGFA-217ENST00000518538 PAPSS2O95340 614 aaPredicted RBP22.78■■□□□ 1.24
VEGFA-217ENST00000518538 FTLP02792 175 aaPredicted RBP22.78■■□□□ 1.24
VEGFA-217ENST00000518538 CHRM1P11229 460 aaPredicted RBP22.78■■□□□ 1.24
VEGFA-217ENST00000518538 TACR2P21452 398 aa22.78■■□□□ 1.24
VEGFA-217ENST00000518538 RDXP35241 583 aaKnown RBP22.78■■□□□ 1.24
VEGFA-217ENST00000518538 RFC1P35251 1148 aaPredicted RBP22.78■■□□□ 1.24
VEGFA-217ENST00000518538 PTPN9P43378 593 aa22.78■■□□□ 1.24
VEGFA-217ENST00000518538 MRPS21P82921 87 aaKnown RBP22.78■■□□□ 1.24
VEGFA-217ENST00000518538 SATB1Q01826 763 aa22.78■■□□□ 1.24
VEGFA-217ENST00000518538 CCDC14Q49A88 953 aa22.78■■□□□ 1.24
VEGFA-217ENST00000518538 C10orf76Q5T2E6 689 aa22.78■■□□□ 1.24
VEGFA-217ENST00000518538 RAP1GAP2Q684P5 730 aa22.78■■□□□ 1.24
VEGFA-217ENST00000518538 RNF43Q68DV7 783 aa22.78■■□□□ 1.24
VEGFA-217ENST00000518538 ACDQ96AP0 544 aa22.78■■□□□ 1.24
VEGFA-217ENST00000518538 PRMT1Q99873 361 aaKnown RBP22.78■■□□□ 1.24
VEGFA-217ENST00000518538 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.78■■□□□ 1.24
VEGFA-217ENST00000518538 ARHGAP20Q9P2F6 1191 aa22.78■■□□□ 1.24
VEGFA-217ENST00000518538 CLEC4EQ9ULY5 219 aa22.78■■□□□ 1.24
VEGFA-217ENST00000518538 TBL1XO60907 577 aa22.77■■□□□ 1.24
VEGFA-217ENST00000518538 MFAP3LO75121 409 aa22.77■■□□□ 1.24
VEGFA-217ENST00000518538 GPD1P21695 349 aa22.77■■□□□ 1.24
VEGFA-217ENST00000518538 KIR2DL1P43626 348 aaPredicted RBP22.77■■□□□ 1.24
VEGFA-217ENST00000518538 ATP11AP98196 1134 aa22.77■■□□□ 1.24
VEGFA-217ENST00000518538 PPP1R15BQ5SWA1 713 aa22.77■■□□□ 1.24
VEGFA-217ENST00000518538 WDR59Q6PJI9 974 aa22.77■■□□□ 1.24
VEGFA-217ENST00000518538 TMC6Q7Z403 805 aa22.77■■□□□ 1.24
VEGFA-217ENST00000518538 LGI2Q8N0V4 545 aa22.77■■□□□ 1.24
VEGFA-217ENST00000518538 KCNV2Q8TDN2 545 aa22.77■■□□□ 1.24
VEGFA-217ENST00000518538 MYEOVQ96EZ4 313 aa22.77■■□□□ 1.24
VEGFA-217ENST00000518538 TRIM11Q96F44 468 aa22.77■■□□□ 1.24
VEGFA-217ENST00000518538 TKTL2Q9H0I9 626 aa22.77■■□□□ 1.24
VEGFA-217ENST00000518538 ISCUQ9H1K1 167 aa22.77■■□□□ 1.24
VEGFA-217ENST00000518538 ABHD10Q9NUJ1 306 aa22.77■■□□□ 1.24
VEGFA-217ENST00000518538 PARVAQ9NVD7 372 aa22.77■■□□□ 1.24
VEGFA-217ENST00000518538 ANKRD62A6NC57 917 aa22.76■■□□□ 1.23
VEGFA-217ENST00000518538 PRRT4C9JH25 899 aa22.76■■□□□ 1.23
VEGFA-217ENST00000518538 F5H5T6 163 aa22.76■■□□□ 1.23
VEGFA-217ENST00000518538 PAGE1O75459 146 aa22.76■■□□□ 1.23
VEGFA-217ENST00000518538 ADCY5O95622 1261 aa22.76■■□□□ 1.23
VEGFA-217ENST00000518538 SP9P0CG40 484 aa22.76■■□□□ 1.23
VEGFA-217ENST00000518538 ATXN1P54253 815 aaKnown RBP22.76■■□□□ 1.23
VEGFA-217ENST00000518538 RPS24P62847 133 aaKnown RBP22.76■■□□□ 1.23
VEGFA-217ENST00000518538 CSTF1Q05048 431 aaKnown RBP22.76■■□□□ 1.23
VEGFA-217ENST00000518538 TBX2Q13207 712 aaPredicted RBP22.76■■□□□ 1.23
VEGFA-217ENST00000518538 MAMLD1Q13495 774 aa22.76■■□□□ 1.23
VEGFA-217ENST00000518538 TSR1Q2NL82 804 aaKnown RBP22.76■■□□□ 1.23
VEGFA-217ENST00000518538 C15orf59Q2T9L4 293 aaPredicted RBP22.76■■□□□ 1.23
VEGFA-217ENST00000518538 ZNF528Q3MIS6 628 aa22.76■■□□□ 1.23
VEGFA-217ENST00000518538 HSF5Q4G112 596 aaPredicted RBP22.76■■□□□ 1.23
VEGFA-217ENST00000518538 C2orf27AQ580R0 203 aa22.76■■□□□ 1.23
VEGFA-217ENST00000518538 PLEKHA7Q6IQ23 1121 aa22.76■■□□□ 1.23
VEGFA-217ENST00000518538 STRADAQ7RTN6 431 aa22.76■■□□□ 1.23
VEGFA-217ENST00000518538 DNAAF5Q86Y56 855 aa22.76■■□□□ 1.23
VEGFA-217ENST00000518538 ZNF557Q8N988 423 aaPredicted RBP22.76■■□□□ 1.23
VEGFA-217ENST00000518538 MCEEQ96PE7 176 aa22.76■■□□□ 1.23
VEGFA-217ENST00000518538 ZNHIT6Q9NWK9 470 aaKnown RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms