RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 ZIM3Q96PE6 472 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 PPP1R10Q96QC0 940 aaKnown RBP6.12□□□□□ -1.43
CD47-205ENST00000517766 SH3GL2Q99962 352 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 TRIM51Q9BSJ1 452 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 PLEKHA4Q9H4M7 779 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 PIF1Q9H611 641 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 ST7Q9NRC1 585 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 RNF186Q9NXI6 227 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 WHRNQ9P202 907 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 VPS18Q9P253 973 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 DDX20Q9UHI6 824 aaKnown RBP6.12□□□□□ -1.43
CD47-205ENST00000517766 FAM153AQ9UHL3 310 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 DRG1Q9Y295 367 aaKnown RBP6.12□□□□□ -1.43
CD47-205ENST00000517766 HIF3AQ9Y2N7 669 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 SNX24Q9Y343 169 aa6.12□□□□□ -1.43
CD47-205ENST00000517766 PTPRDP23468 1912 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 TSC2P49815 1807 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 hCG_1818297A0A087WSY0 165 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 TCRBV7S2A1N4TA0A589 114 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 LRRD1A4D1F6 860 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 FAM86C2PA6NEL3 165 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 CCDC85CA6NKD9 419 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 C2CD4BA6NLJ0 364 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 E5RJQ4 531 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 CYB561D2O14569 222 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 PTGESO14684 152 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 PPEF2O14830 753 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 PPFIA2O75334 1257 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 LRCH4O75427 683 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 TRUB2O95900 331 aaKnown RBP6.11□□□□□ -1.43
CD47-205ENST00000517766 PFKMP08237 780 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 PDGFRAP16234 1089 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 KDELR1P24390 212 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 SDC4P31431 198 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 GRK4P32298 578 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 RDXP35241 583 aaKnown RBP6.11□□□□□ -1.43
CD47-205ENST00000517766 GJC1P36383 396 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 MAP2K2P36507 400 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 HSD17B3P37058 310 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 RPL21P46778 160 aaKnown RBP6.11□□□□□ -1.43
CD47-205ENST00000517766 KCNJ1P48048 391 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 LHX1P48742 406 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 RPL34P49207 117 aaKnown RBP6.11□□□□□ -1.43
CD47-205ENST00000517766 ACLYP53396 1101 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 PMS2P54278 862 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 PLTPP55058 493 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 EIF3BP55884 814 aaKnown RBP6.11□□□□□ -1.43
CD47-205ENST00000517766 SLC25A11Q02978 314 aaKnown RBP6.11□□□□□ -1.43
CD47-205ENST00000517766 KRT17Q04695 432 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 TFDP2Q14188 446 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 PDK2Q15119 407 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 TRADDQ15628 312 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 BOLA3Q53S33 107 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 ZC3H12AQ5D1E8 599 aaKnown RBP6.11□□□□□ -1.43
CD47-205ENST00000517766 EFHC1Q5JVL4 640 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 EXOSC6Q5RKV6 272 aaKnown RBP6.11□□□□□ -1.43
CD47-205ENST00000517766 MFSD7Q6UXD7 560 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 DSTYKQ6XUX3 929 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 FAM183BPQ6ZVS7 135 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 ZNF365Q70YC5 407 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 TMC3Q7Z5M5 1100 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 VSIG1Q86XK7 387 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 MAP7D3Q8IWC1 876 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 ADGRF2Q8IZF7 708 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 TMEM130Q8N3G9 435 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 DTWD1Q8N5C7 304 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 CMASQ8NFW8 434 aaPredicted RBP6.11□□□□□ -1.43
CD47-205ENST00000517766 UBLCP1Q8WVY7 318 aaPredicted RBP6.11□□□□□ -1.43
CD47-205ENST00000517766 KBTBD7Q8WVZ9 684 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 TEKT4Q8WW24 435 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 C1orf54Q8WWF1 131 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 RXFP2Q8WXD0 754 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 ART4Q93070 314 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 SNF8Q96H20 258 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 CCDC114Q96M63 670 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 GLT1D1Q96MS3 346 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 UROC1Q96N76 676 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 TBCBQ99426 244 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 HNRNPABQ99729 332 aaKnown RBP6.11□□□□□ -1.43
CD47-205ENST00000517766 CNPY3Q9BT09 278 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 FOXP3Q9BZS1 431 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 TRIM31Q9BZY9 425 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 NEUROG2Q9H2A3 272 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 CXCL16Q9H2A7 254 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 RSAD1Q9HA92 442 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 CHST7Q9NS84 486 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 ZDHHC18Q9NUE0 388 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 ASIC3Q9UHC3 531 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 ADAM21Q9UKJ8 722 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 AP4E1Q9UPM8 1137 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 FAN1Q9Y2M0 1017 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 PATJQ8NI35 1801 aa6.11□□□□□ -1.43
CD47-205ENST00000517766 A0A0U1RQF3 1178 aa6.1□□□□□ -1.43
CD47-205ENST00000517766 GOLGA6CA6NDK9 693 aa6.1□□□□□ -1.43
CD47-205ENST00000517766 UPK3BL1B0FP48 263 aa6.1□□□□□ -1.43
CD47-205ENST00000517766 ZNF487B1APH4 448 aa6.1□□□□□ -1.43
CD47-205ENST00000517766 HMGB1P1B2RPK0 211 aaPredicted RBP6.1□□□□□ -1.43
CD47-205ENST00000517766 UPK3BL2E5RIL1 263 aa6.1□□□□□ -1.43
CD47-205ENST00000517766 GABRDO14764 452 aa6.1□□□□□ -1.43
CD47-205ENST00000517766 XPO1O14980 1071 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms