RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 UNC13DQ70J99 1090 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 FAM214BQ7L5A3 538 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 SPRED2Q7Z698 418 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 MRPL10Q7Z7H8 261 aaKnown RBP2.94□□□□□ -1.94
SKP1-204ENST00000517691 GALNT13Q8IUC8 556 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 EGFL6Q8IUX8 553 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 NELFCDQ8IXH7 590 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 ANKRD52Q8NB46 1076 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 TMEM145Q8NBT3 493 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 KREMEN2Q8NCW0 462 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 LILRB1Q8NHL6 650 aaPredicted RBP2.94□□□□□ -1.94
SKP1-204ENST00000517691 RNF141Q8WVD5 230 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 UCMAQ8WVF2 138 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 POMGNT1Q8WZA1 660 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 ERCC4Q92889 916 aaPredicted RBP2.94□□□□□ -1.94
SKP1-204ENST00000517691 USP13Q92995 863 aaPredicted RBP2.94□□□□□ -1.94
SKP1-204ENST00000517691 ZNF689Q96CS4 500 aaPredicted RBP2.94□□□□□ -1.94
SKP1-204ENST00000517691 MAGEB10Q96LZ2 347 aaPredicted RBP2.94□□□□□ -1.94
SKP1-204ENST00000517691 NT5C1BQ96P26 610 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 CASD1Q96PB1 797 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 ASB2Q96Q27 587 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 TGS1Q96RS0 853 aaKnown RBP2.94□□□□□ -1.94
SKP1-204ENST00000517691 GAD1Q99259 594 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 C17orf80Q9BSJ5 609 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 MSTO1Q9BUK6 570 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 CCDC94Q9BW85 323 aaPredicted RBP2.94□□□□□ -1.94
SKP1-204ENST00000517691 ASPNQ9BXN1 380 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 MRPL9Q9BYD2 267 aaKnown RBP2.94□□□□□ -1.94
SKP1-204ENST00000517691 TMEM117Q9H0C3 514 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 IKZF4Q9H2S9 585 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 PRDM12Q9H4Q4 367 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 PCIF1Q9H4Z3 704 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 TMEM206Q9H813 350 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 AKTIPQ9H8T0 292 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 FAM204AQ9H8W3 233 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 C1GALT1Q9NS00 363 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 SAMD15Q9P1V8 674 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 ITGB1BP2Q9UKP3 347 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 FBXL21Q9UKT6 434 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 TNFSF13BQ9Y275 285 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 INVSQ9Y283 1065 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 PCDHB12Q9Y5F1 795 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 MRFAP1Q9Y605 127 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 LAMA2P24043 3122 aaKnown RBP2.94□□□□□ -1.94
SKP1-204ENST00000517691 ALPK3Q96L96 1907 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 FAM237AA0A1B0GTK4 181 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 NT5C1B-RDH14C9J2C7 533 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 ANKRD63C9JTQ0 380 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 H0Y3Z8 333 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 MASP2O00187 686 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 CBX4O00257 560 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 MAFKO60675 156 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 TADA3O75528 432 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 TUSC2O75896 110 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 RECQL4O94761 1208 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 ALDH2P05091 517 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 EDN1P05305 212 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 SCG5P05408 212 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 TPM2P07951 284 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 CLTAP09496 248 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 FOSL1P15407 271 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 ATF7P17544 494 aaPredicted RBP2.93□□□□□ -1.94
SKP1-204ENST00000517691 NAT1P18440 290 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 HOXC12P31275 282 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 HPDP32754 393 aaPredicted RBP2.93□□□□□ -1.94
SKP1-204ENST00000517691 KRT9P35527 623 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 PBX3P40426 434 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 MLH1P40692 756 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 STAT1P42224 750 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 OR1G1P47890 313 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 ACOT2P49753 483 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 SCNN1GP51170 649 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 ZNF132P52740 706 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 MAPK10P53779 464 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 BCAR1P56945 870 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 KRT17Q04695 432 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 SPAG1Q07617 926 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 GALNT1Q10472 559 aaPredicted RBP2.93□□□□□ -1.94
SKP1-204ENST00000517691 STK4Q13043 487 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 CDK5R2Q13319 367 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 GPM6BQ13491 265 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 ALCAMQ13740 583 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 PPP2R5DQ14738 602 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 NOLC1Q14978 699 aaKnown RBP eCLIP2.93□□□□□ -1.94
SKP1-204ENST00000517691 TAF12Q16514 161 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 PRSS53Q2L4Q9 553 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 SGO2Q562F6 1265 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 DGKKQ5KSL6 1271 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 SLC35F1Q5T1Q4 408 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 HECTD3Q5T447 861 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 SLFN12LQ6IEE8 588 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 POMZP3Q6PJE2 187 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 ZPBP2Q6X784 338 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 LRRC55Q6ZSA7 311 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 NEK10Q6ZWH5 1172 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 ZNF280BQ86YH2 543 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 SHISA5Q8N114 240 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 LRRC43Q8N309 656 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 NAT8LQ8N9F0 302 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 COLGALT1Q8NBJ5 622 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms