RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PYGLP06737 847 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 GYS1P13807 737 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 AOC1P19801 751 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 ADSSP30520 456 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 ATICP31939 592 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 ACADSBP45954 432 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 SULT1E1P49888 294 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 RPL14P50914 215 aaKnown RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 DPY19L2P1Q6NXN4 242 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 MPZL3Q6UWV2 235 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 TRIM74Q86UV6 250 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 TRIM73Q86UV7 250 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 NIPA2Q8N8Q9 360 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 COLGALT1Q8NBJ5 622 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 ACTRT2Q8TDY3 377 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 HPDLQ96IR7 371 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 ZBTB45Q96K62 511 aaPredicted RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 PAIP1Q9H074 479 aaKnown RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 PNPLA3Q9NST1 481 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 WRAP73Q9P2S5 460 aaPredicted RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 POMPQ9Y244 141 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 ANKRD6Q9Y2G4 727 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 SQORQ9Y6N5 450 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 C3orf70A6NLC5 250 aaPredicted RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 ZMPSTE24O75844 475 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 FAM155BO75949 473 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 TMEM63AO94886 807 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 IL1BP01584 269 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 ITGB3P05106 788 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 LCP1P13796 627 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 TFE3P19532 575 aaPredicted RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 RAP1GAPP47736 663 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 HSD17B4P51659 736 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 PKNOX1P55347 436 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 ITKQ08881 620 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 KLF10Q13118 480 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 MPP3Q13368 585 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 DPYSQ14117 519 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 LPIN1Q14693 890 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 UGCGQ16739 394 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 AASDHQ4L235 1098 aaPredicted RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 ARMC3Q5W041 872 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 GLIS1Q8NBF1 620 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 PPHLN1Q8NEY8 458 aaKnown RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 BEST2Q8NFU1 509 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 HTR3CQ8WXA8 447 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 GATA6Q92908 595 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 CCDC126Q96EE4 140 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 PRMT6Q96LA8 375 aaPredicted RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 BEGAINQ9BUH8 593 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 CDH19Q9H159 772 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 TMEM134Q9H6X4 195 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 PNPOQ9NVS9 261 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 LRP5O75197 1615 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 TRIM38O00635 465 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 PFDN6O15212 129 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 PEX1O43933 1283 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 LRCH4O75427 683 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 MICAL2O94851 1124 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 PABPC4LP0CB38 370 aaKnown RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 FCGR1AP12314 374 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 MGAT1P26572 445 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 ADORA2BP29275 332 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 PPARGP37231 505 aaPredicted RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 CCNFP41002 786 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 C21orf59P57076 290 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 SPP2Q13103 211 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 ORC1Q13415 861 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 PLEKHO2Q8TD55 490 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 SEPT1Q8WYJ6 367 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 TSPAN17Q96FV3 270 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 TEX13BQ9BXU2 312 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 LHX5Q9H2C1 402 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 NMRAL1Q9HBL8 299 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 BAG5Q9UL15 447 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 AP4E1Q9UPM8 1137 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 RUVBL2Q9Y230 463 aaKnown RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 SH3GLB1Q9Y371 365 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 TSC22D4Q9Y3Q8 395 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 ATRNL1Q5VV63 1379 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 ECM29Q5VYK3 1845 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 MAGEB16A2A368 324 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 EEF2KO00418 725 aaKnown RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 CYB561D2O14569 222 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 DDHD2O94830 711 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 ASLP04424 464 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 OCM2P0CE71 109 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 OCMP0CE72 109 aaPredicted RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 GM2AP17900 193 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 PIK3R1P27986 724 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 TUBP50607 506 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 GDF10P55107 478 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 TGFB2P61812 414 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 VPS72Q15906 364 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 RALGPS1Q5JS13 557 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 NAPEPLDQ6IQ20 393 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 C10orf107Q8IVU9 208 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 AHI1Q8N157 1196 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 EFCAB3Q8N7B9 438 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms