RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 PRICKLE1Q96MT3 831 aaPredicted RBP8.65□□□□□ -1.02
SCARNA20.3-201ENST00000516913 UBXN6Q9BZV1 441 aa8.65□□□□□ -1.02
SCARNA20.3-201ENST00000516913 MIR1-1HGQ9H1L0 117 aa8.65□□□□□ -1.02
SCARNA20.3-201ENST00000516913 GAREM1Q9H706 876 aa8.65□□□□□ -1.02
SCARNA20.3-201ENST00000516913 ACP6Q9NPH0 428 aa8.65□□□□□ -1.02
SCARNA20.3-201ENST00000516913 ABCB8Q9NUT2 735 aa8.65□□□□□ -1.02
SCARNA20.3-201ENST00000516913 RAB20Q9NX57 234 aa8.65□□□□□ -1.02
SCARNA20.3-201ENST00000516913 CYTH4Q9UIA0 394 aa8.65□□□□□ -1.02
SCARNA20.3-201ENST00000516913 TSPAN16Q9UKR8 245 aa8.65□□□□□ -1.02
SCARNA20.3-201ENST00000516913 RAXQ9Y2V3 346 aa8.65□□□□□ -1.02
SCARNA20.3-201ENST00000516913 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.65□□□□□ -1.02
SCARNA20.3-201ENST00000516913 BOD1L1Q8NFC6 3051 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 HECTD1Q9ULT8 2610 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 A0A1B0GTW7 788 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 H0Y8X5 98 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 BCAT2O15382 392 aaPredicted RBP8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ZNF202O95125 648 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 EPHX1P07099 455 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 PSMC2P35998 433 aaKnown RBP8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SYKP43405 635 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 DAOAP59103 153 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 RPS24P62847 133 aaKnown RBP8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ADIGQ0VDE8 80 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 LRMPQ12912 555 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 BYSLQ13895 437 aaKnown RBP8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 COL28A1Q2UY09 1125 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 PIK3R6Q5UE93 754 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 KRT39Q6A163 491 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 INTS8Q75QN2 995 aaKnown RBP8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ANKS1BQ7Z6G8 1248 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ENGASEQ8NFI3 743 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 CADM4Q8NFZ8 388 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SLC35F5Q8WV83 523 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SLC35C1Q96A29 364 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 BIRC7Q96CA5 298 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 FAM129BQ96TA1 746 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 CIPCQ9C0C6 399 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SLC32A1Q9H598 525 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 TM9SF3Q9HD45 589 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 TJP2Q9UDY2 1190 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 LSM7Q9UK45 103 aaKnown RBP8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 PTPRBP23467 1997 aa8.64□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ADAMTS20P59510 1910 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 TMEM8BA6NDV4 472 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 PLK4O00444 970 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 CALUO43852 315 aaPredicted RBP8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 NDUFS2O75306 463 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 CLSTN1O94985 981 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 P4HA1P13674 534 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 VAV1P15498 845 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 CTSKP43235 329 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 MXI1P50539 228 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 IRAK1P51617 712 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ZNF132P52740 706 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 COG7P83436 770 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 IL9RQ01113 521 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 APBA1Q02410 837 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ENPEPQ07075 957 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SLC14A1Q13336 389 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 CUL2Q13617 745 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 TAF5Q15542 800 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ZNF423Q2M1K9 1284 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SYPL2Q5VXT5 272 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ATL3Q6DD88 541 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 CHST9Q7L1S5 443 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 TMPRSS7Q7RTY8 843 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ARHGEF19Q8IW93 802 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 FMR1NBQ8N0W7 255 aaPredicted RBP8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 HDDC3Q8N4P3 179 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 FBXL13Q8NEE6 735 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 OR52K2Q8NGK3 314 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 OR2T3Q8NH03 318 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SPATA20Q8TB22 786 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 DDI1Q8WTU0 396 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 HNRNPLLQ8WVV9 542 aaKnown RBP8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SLC39A13Q96H72 371 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 FCRL2Q96LA5 508 aaPredicted RBP8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 KREMEN1Q96MU8 473 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 MED15Q96RN5 788 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 NUCKS1Q9H1E3 243 aaKnown RBP8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 TM7SF3Q9NS93 570 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SLCO3A1Q9UIG8 710 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 FRMD4BQ9Y2L6 1034 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 NFE2L3Q9Y4A8 694 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 COL12A1Q99715 3063 aa8.63□□□□□ -1.03
SCARNA20.3-201ENST00000516913 MYH10P35580 1976 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 A0A1W2PQ27 194 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 A0A1W2PQ64 194 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 A0A1W2PR77 199 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 TRABD2BA6NFA1 517 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 TTC34A8MYJ7 566 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 I6L893 689 aaPredicted RBP8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 XPO1O14980 1071 aaKnown RBP8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 ZIC2O95409 532 aaPredicted RBP8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 SYPP08247 313 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 RALAP11233 206 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 LCP1P13796 627 aa8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 BRD2P25440 801 aaKnown RBP8.62□□□□□ -1.03
SCARNA20.3-201ENST00000516913 GTF2H1P32780 548 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms