RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ZNF367Q7RTV3 350 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 DDX53Q86TM3 631 aaKnown RBP-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 ZNF561Q8N587 486 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 ARL14EPQ8N8R7 260 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 OR13A1Q8NGR1 328 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 CPT1BQ92523 772 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 RAB24Q969Q5 203 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 ALG14Q96F25 216 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 P2RY11Q96G91 374 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 BARD1Q99728 777 aaKnown RBP-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 SPATA9Q9BWV2 254 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 SPRR2GQ9BYE4 73 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 ARL8BQ9NVJ2 186 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 TAAR2Q9P1P5 351 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 TBC1D14Q9P2M4 693 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 B4GALT7Q9UBV7 327 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 CACNG5Q9UF02 275 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 ASIC3Q9UHC3 531 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 CPA4Q9UI42 421 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 MRPS23Q9Y3D9 190 aaKnown RBP-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 UMODL1Q5DID0 1318 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 FBN2P35556 2912 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 HHLA1C9JL84 531 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 H0Y9J4 135 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 C16orf97H3BN30 126 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 B4GALT2O60909 372 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 USP12O75317 370 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 BRD1O95696 1058 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 POLE2P56282 527 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 NLRP5P59047 1200 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 ZP1P60852 638 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 LYZP61626 148 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 KRTAP21-1Q3LI58 79 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 TTC39AQ5SRH9 613 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 TMEM63BQ5T3F8 832 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 SEL1L3Q68CR1 1132 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 LRP11Q86VZ4 500 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 PNPLA1Q8N8W4 532 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 ZNF441Q8N8Z8 693 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 OR10V1Q8NGI7 309 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 OR2L2Q8NH16 312 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 WDR20Q8TBZ3 569 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 MFSD3Q96ES6 412 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 APOLD1Q96LR9 279 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 EBF4Q9BQW3 602 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 PTDSS2Q9BVG9 487 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 POLDIP3Q9BY77 421 aaKnown RBP-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 GREM2Q9H772 168 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 LRRC4Q9HBW1 653 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 CABP5Q9NP86 173 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 EPHA6Q9UF33 1036 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 NDRG4Q9ULP0 352 aaKnown RBP-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 ZBTB1Q9Y2K1 713 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 SNX14Q9Y5W7 946 aa-0.48□□□□□ -2.49
RNU6-539P-201ENST00000516665 A0A1W2PS18 150 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 PRSS29PA6NIE9 313 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 VWA5AO00534 786 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 CTNND1O60716 968 aaKnown RBP-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 ZNF19P17023 458 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 LILRA4P59901 499 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 SUMO2P61956 95 aaKnown RBP-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 NEDD9Q14511 834 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 SETMARQ53H47 684 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 C20orf194Q5TEA3 1177 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 DOK6Q6PKX4 331 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 ADGRD2Q7Z7M1 963 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 IZUMO1Q8IYV9 350 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 AHI1Q8N157 1196 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 FSTL5Q8N475 847 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 TMEM87AQ8NBN3 555 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 ST13P5Q8NFI4 369 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 TMEM171Q8WVE6 324 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 OSCP1Q8WVF1 389 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 TMEM190Q8WZ59 177 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 EAF2Q96CJ1 260 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 RSPRY1Q96DX4 576 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 SENP5Q96HI0 755 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 TRIM51Q9BSJ1 452 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 DHRS4Q9BTZ2 278 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 EPS8L2Q9H6S3 715 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 CATSPERBQ9H7T0 1116 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 EBF2Q9HAK2 575 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 PRDM16Q9HAZ2 1276 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 TRIM39Q9HCM9 518 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 SNX15Q9NRS6 342 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 PRKAG3Q9UGI9 489 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 IVNS1ABPQ9Y6Y0 642 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 TNKSO95271 1327 aa-0.49□□□□□ -2.49
RNU6-539P-201ENST00000516665 BLOC1S5-TXNDC5H3BN57 136 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 hCG_1984214I3L0E3 225 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 EYA2O00167 538 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 CDX4O14627 284 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 PRKD3O94806 890 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 CHEK2O96017 543 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 APPP05067 770 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 PROS1P07225 676 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 GNB3P16520 340 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 GPTP24298 496 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 CHRNB4P30926 498 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 ETFBP38117 255 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms