RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 CHRNEQ04844 493 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 YWHAHQ04917 246 aaPredicted RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 BIRC3Q13489 604 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TRPC3Q13507 836 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PTPN14Q15678 1187 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NFE2Q16621 373 aaPredicted RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SGSM1Q2NKQ1 1148 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 USP41Q3LFD5 358 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 WDR72Q3MJ13 1102 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CFAP221Q4G0U5 840 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PAN2Q504Q3 1202 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TIGD5Q53EQ6 642 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZNF667Q5HYK9 610 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SLC35F1Q5T1Q4 408 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TCERG1LQ5VWI1 586 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 LMBRD2Q68DH5 695 aaPredicted RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DENND5AQ6IQ26 1287 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SLC8B1Q6J4K2 584 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZNF280DQ6N043 979 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DPY19L2P1Q6NXN4 242 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GALNT18Q6P9A2 607 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GBP6Q6ZN66 633 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TMEM173Q86WV6 379 aaPredicted RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GAS2L3Q86XJ1 694 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PDCL2Q8N4E4 241 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 UBR7Q8N806 425 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ANKS4BQ8N8V4 417 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RNF169Q8NCN4 708 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CCDC150Q8NCX0 1101 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RCBTB1Q8NDN9 531 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TMEM52Q8NDY8 209 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PDZD8Q8NEN9 1154 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NUP43Q8NFH3 380 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SPPL3Q8TCT6 385 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SPPL2BQ8TCT7 592 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TAS1R2Q8TE23 839 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 C2orf15Q8WU43 125 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 HDAC7Q8WUI4 952 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 POF1BQ8WVV4 589 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KBTBD7Q8WVZ9 684 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MYLIPQ8WY64 445 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SHC3Q92529 594 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SEMA4DQ92854 862 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NINJ1Q92982 152 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KISS1RQ969F8 398 aaPredicted RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PPP2R3CQ969Q6 453 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 C18orf25Q96B23 403 aaPredicted RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CCDC127Q96BQ5 260 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TIFAQ96CG3 184 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MRPL38Q96DV4 380 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 EEF2KMTQ96G04 330 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FUBP3Q96I24 572 aaKnown RBP eCLIP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 HPDLQ96IR7 371 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MAP6Q96JE9 813 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TNIP3Q96KP6 325 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SENP8Q96LD8 212 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CLUHP3Q96NS8 147 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NT5C1BQ96P26 610 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FAM193BQ96PV7 902 aaPredicted RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 JMJD8Q96S16 334 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CDCA3Q99618 268 aaPredicted RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ACBD6Q9BR61 282 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 C17orf80Q9BSJ5 609 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TTPALQ9BTX7 342 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NUP58Q9BVL2 599 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 COLEC11Q9BWP8 271 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 JAM3Q9BX67 310 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 VN1R3Q9BXE9 311 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RHOBTB2Q9BYZ6 727 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TTYH3Q9C0H2 523 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DNAI2Q9GZS0 605 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 INTS2Q9H0H0 1204 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZBP1Q9H171 429 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CXCL16Q9H2A7 254 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GANQ9H2C0 597 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GOLGA2P5Q9HBQ8 144 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 APOBEC3GQ9HC16 384 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PNPLA8Q9NP80 782 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZFP64Q9NPA5 681 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NGRNQ9NPE2 291 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TLR9Q9NR96 1032 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GPR27Q9NS67 375 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DPP3Q9NY33 737 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TAB2Q9NYJ8 693 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MARCH2Q9P0N8 246 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CEP72Q9P209 647 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FNIP2Q9P278 1114 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 HSFX1Q9UBD0 423 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MTRRQ9UBK8 725 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DNAJB4Q9UDY4 337 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 EBF1Q9UH73 591 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PUF60Q9UHX1 559 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CDH9Q9ULB4 789 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 L1RE1Q9UN81 338 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 AGAP1Q9UPQ3 857 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SIK3Q9Y2K2 1263 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 YBX2Q9Y2T7 364 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PRG3Q9Y2Y8 225 aaPredicted RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NUB1Q9Y5A7 615 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms