RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 GEN1Q17RS7 908 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 FAM133BQ5BKY9 247 aaKnown RBP11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ZC3H12AQ5D1E8 599 aaKnown RBP11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 EGFLAMQ63HQ2 1017 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 RFWD3Q6PCD5 774 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 TRIM72Q6ZMU5 477 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 CCDC117Q8IWD4 279 aaPredicted RBP11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ATP6V0D2Q8N8Y2 350 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 HJURPQ8NCD3 748 aaPredicted RBP11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 RNF34Q969K3 372 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 LOXL4Q96JB6 756 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ZC3H10Q96K80 434 aaKnown RBP11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 GABRG3Q99928 467 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 FUCA2Q9BTY2 467 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 FAM204AQ9H8W3 233 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 DDIT4Q9NX09 232 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 NOCTQ9UK39 431 aaKnown RBP11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 HCN2Q9UL51 889 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 CLEC4EQ9ULY5 219 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 GON4LQ3T8J9 2241 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 SPAG17Q6Q759 2223 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 GOLGA6L7A0A1B0GV03 622 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 KCNU1A8MYU2 1149 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 LRP3O75074 770 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 GRAP2O75791 330 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 F9P00740 461 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 HOXB2P14652 356 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 RNASE9P60153 205 aaKnown RBP11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ARID5AQ03989 594 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 IQCB1Q15051 598 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 LPAL2Q16609 132 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 MS4A13Q5J8X5 152 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 RNF43Q68DV7 783 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ARCQ7LC44 396 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 PGBD3Q8N328 593 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 DCLK2Q8N568 766 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 MDGA1Q8NFP4 955 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 FIBINQ8TAL6 211 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 WFIKKN2Q8TEU8 576 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 CPA5Q8WXQ8 436 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ACOX2Q99424 681 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 CIPCQ9C0C6 399 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ZDHHC4Q9NPG8 344 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 BCCIPQ9P287 314 aaKnown RBP eCLIP11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 THAP10Q9P2Z0 257 aaPredicted RBP11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 STAP1Q9ULZ2 295 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 MYO6Q9UM54 1294 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 PLA2G4CQ9UP65 541 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 PAXBP1Q9Y5B6 917 aa11.62□□□□□ -0.55
SCARNA16.1-201ENST00000516133 KIAA1549LQ6ZVL6 1849 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 A0A1W2PQF6 199 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 TCRBV21S2A2A0A5A6 115 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 M0QYT0 321 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 TEX33O43247 280 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 FOXD2O60548 495 aaPredicted RBP11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 TBL1XO60907 577 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 DAB1O75553 588 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 RHOBTB1O94844 696 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 MOCS2O96007 188 aaPredicted RBP11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 SERPINC1P01008 464 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 CYP1A1P04798 512 aaPredicted RBP11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ATP5BP06576 529 aaKnown RBP11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 CHRNB2P17787 502 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 MMP8P22894 467 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 HLA-FP30511 346 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 SLC6A4P31645 630 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 WASP42768 502 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 NOMO3P69849 1222 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 PITX1P78337 314 aaPredicted RBP11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ENPP2Q13822 863 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 STARD3Q14849 445 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ELF2Q15723 593 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 FAM102AQ5T9C2 384 aaPredicted RBP11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 NAA35Q5VZE5 725 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 NADSYN1Q6IA69 706 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 SND1Q7KZF4 910 aaKnown RBP eCLIP11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 KIAA0907Q7Z7F0 614 aaPredicted RBP11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 KBTBD6Q86V97 674 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 XYLT1Q86Y38 959 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 FAM160A2Q8N612 972 aaPredicted RBP11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 OLIG1Q8TAK6 271 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 SLC20A1Q8WUM9 679 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 HMGB4Q8WW32 186 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 NT5C3BQ969T7 300 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 NPY6RQ99463 290 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 NUCKS1Q9H1E3 243 aaKnown RBP11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ABCB8Q9NUT2 735 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 CACNA2D2Q9NY47 1150 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 STIM2Q9P246 746 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 GGA2Q9UJY4 613 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 STON1Q9Y6Q2 735 aa11.61□□□□□ -0.55
SCARNA16.1-201ENST00000516133 SYNJ2BP-COX16A0A087WUM0 186 aa11.6□□□□□ -0.55
SCARNA16.1-201ENST00000516133 A0A1B0GTH6 734 aa11.6□□□□□ -0.55
SCARNA16.1-201ENST00000516133 A0A1W2PQC6 194 aa11.6□□□□□ -0.55
SCARNA16.1-201ENST00000516133 F5H5T6 163 aa11.6□□□□□ -0.55
SCARNA16.1-201ENST00000516133 GOLGA6L19H0YKK7 550 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms