RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 MRGBPQ9NV56 204 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 C1orf167Q5SNV9 1468 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 A0A088AWK7 358 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 GSAPA4D1B5 854 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 SMAPO00193 183 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 HIST1H2ABP04908 130 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 UBTFL6P0CB48 400 aaPredicted RBP11.27□□□□□ -0.6
TRIM41-209ENST00000515834 ZNF10P21506 573 aaPredicted RBP11.27□□□□□ -0.6
TRIM41-209ENST00000515834 SOX6P35712 828 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 FXR1P51114 621 aaKnown RBP eCLIP11.27□□□□□ -0.6
TRIM41-209ENST00000515834 GNA13Q14344 377 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 KBTBD12Q3ZCT8 623 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 HIST3H2AQ7L7L0 130 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 CCDC103Q8IW40 242 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 HIST1H2ACQ93077 130 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 SGSM3Q96HU1 749 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 GMCL1Q96IK5 515 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 ZCCHC17Q9NP64 241 aaKnown RBP11.27□□□□□ -0.6
TRIM41-209ENST00000515834 RAD54BQ9Y620 910 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 CHD1O14646 1710 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 OR10H2O60403 315 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 SEC22BO75396 215 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 DLGAP3O95886 979 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 FGRP09769 529 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 VAV1P15498 845 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 ITGAXP20702 1163 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 STX4Q12846 297 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 GPC2Q8N158 579 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 IL17RAQ96F46 866 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 KCTD14Q9BQ13 255 aaPredicted RBP11.27□□□□□ -0.61
TRIM41-209ENST00000515834 PRRG3Q9BZD7 231 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 VTA1Q9NP79 307 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 PRDM15P57071 1507 aaPredicted RBP11.27□□□□□ -0.61
TRIM41-209ENST00000515834 ZNF839A8K0R7 811 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 CXCL11O14625 94 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 TSC22D2O75157 780 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 PFKPQ01813 784 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 DNAJC3Q13217 504 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 TDRD5Q8NAT2 981 aaKnown RBP11.27□□□□□ -0.61
TRIM41-209ENST00000515834 TMC2Q8TDI7 906 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 ELMO1Q92556 727 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 GAD1Q99259 594 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 GULP1Q9UBP9 304 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 UBA2Q9UBT2 640 aaPredicted RBP11.27□□□□□ -0.61
TRIM41-209ENST00000515834 TMX2Q9Y320 296 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 TMEM114B3SHH9 223 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 FAM228AQ86W67 206 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 SCUBE3Q8IX30 993 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 HDHD2Q9H0R4 259 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 POLG2Q9UHN1 485 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 A0A1B0GTH6 734 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 ANKDD1BA6NHY2 528 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 LACTBL1A8MY62 500 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 TPBGLP0DKB5 382 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 GPR1P46091 355 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 GPR15P49685 360 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 PKN1Q16512 942 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 INTS5Q6P9B9 1019 aaKnown RBP11.27□□□□□ -0.61
TRIM41-209ENST00000515834 USP50Q70EL3 339 aaPredicted RBP11.27□□□□□ -0.61
TRIM41-209ENST00000515834 GET4Q7L5D6 327 aaPredicted RBP11.27□□□□□ -0.61
TRIM41-209ENST00000515834 FAM9CQ8IZT9 166 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 ZNF473Q8WTR7 871 aaKnown RBP11.27□□□□□ -0.61
TRIM41-209ENST00000515834 RNFT2Q96EX2 444 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 NSL1Q96IY1 281 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 SERPINB11Q96P15 392 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 SERPINB12Q96P63 405 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 MRPS26Q9BYN8 205 aaKnown RBP11.27□□□□□ -0.61
TRIM41-209ENST00000515834 ZNF112Q9UJU3 913 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 DNAJC16Q9Y2G8 782 aa11.27□□□□□ -0.61
TRIM41-209ENST00000515834 ZBTB14O43829 449 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 KRT6AP02538 564 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 KRT6BP04259 564 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 PABPC1P11940 636 aaKnown RBP11.26□□□□□ -0.61
TRIM41-209ENST00000515834 ATP6V1B1P15313 513 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 KRT6CP48668 564 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 CNTN2Q02246 1040 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 MPP3Q13368 585 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 SLC29A2Q14542 456 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 SLC25A24Q6NUK1 477 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 TAF2Q6P1X5 1199 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 NAT16Q8N8M0 369 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 KLHL23Q8NBE8 558 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 SPATA20Q8TB22 786 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 SPRTNQ9H040 489 aaPredicted RBP11.26□□□□□ -0.61
TRIM41-209ENST00000515834 ALKBH4Q9NXW9 302 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 BARX2Q9UMQ3 279 aaPredicted RBP11.26□□□□□ -0.61
TRIM41-209ENST00000515834 ALKQ9UM73 1620 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 PRMT3O60678 531 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 KLHL18O94889 574 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 CLK3P49761 638 aaKnown RBP11.26□□□□□ -0.61
TRIM41-209ENST00000515834 SEL1L3Q68CR1 1132 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 PACS1Q6VY07 963 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 DENND6AQ8IWF6 608 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 SLC2A14Q8TDB8 520 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 ERP44Q9BS26 406 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 PPCSQ9HAB8 311 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 CRYL1Q9Y2S2 319 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 SPATA31E1Q6ZUB1 1445 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 RBP1P09455 135 aa11.26□□□□□ -0.61
TRIM41-209ENST00000515834 REXO5Q96IC2 774 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms