RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 KCNU1A8MYU2 1149 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 WASH3PC4AMC7 463 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 DCLK1O15075 740 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 TBL1XO60907 577 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 CYP1A1P04798 512 aaPredicted RBP16.34■□□□□ 0.21
SERF1B-208ENST00000515588 TFE3P19532 575 aaPredicted RBP16.34■□□□□ 0.21
SERF1B-208ENST00000515588 HLA-FP30511 346 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 NTSR1P30989 418 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 RPS24P62847 133 aaKnown RBP16.34■□□□□ 0.21
SERF1B-208ENST00000515588 ZSCAN23Q3MJ62 389 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 MS4A13Q5J8X5 152 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 CEP68Q76N32 757 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 TRMT11Q7Z4G4 463 aaKnown RBP16.34■□□□□ 0.21
SERF1B-208ENST00000515588 ANKS1BQ7Z6G8 1248 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 LUZP1Q86V48 1076 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 KBTBD6Q86V97 674 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 ZDHHC17Q8IUH5 632 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 CHPFQ8IZ52 775 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 SORCS1Q8WY21 1168 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 GABRG3Q99928 467 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 TPSD1Q9BZJ3 242 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 FAM204AQ9H8W3 233 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 DDIT4Q9NX09 232 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 CACNA2D2Q9NY47 1150 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 INVSQ9Y283 1065 aa16.34■□□□□ 0.21
SERF1B-208ENST00000515588 SYNJ2BP-COX16A0A087WUM0 186 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 A0A1B0GTH6 734 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 TCRBV21S2A2A0A5A6 115 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 APOEP02649 317 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 HOXB2P14652 356 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 PTMSP20962 102 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 TGM1P22735 817 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 NOS2P35228 1153 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 SCNN1AP37088 669 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 RNASE9P60153 205 aaKnown RBP16.33■□□□□ 0.2
SERF1B-208ENST00000515588 ARID5AQ03989 594 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 MPP7Q5T2T1 576 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 RAP1GAP2Q684P5 730 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 LAIR1Q6GTX8 287 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 TRNP1Q6NT89 227 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 KIAA1211LQ6NV74 962 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 KIAA0907Q7Z7F0 614 aaPredicted RBP16.33■□□□□ 0.2
SERF1B-208ENST00000515588 FAM160A2Q8N612 972 aaPredicted RBP16.33■□□□□ 0.2
SERF1B-208ENST00000515588 SLC30A5Q8TAD4 765 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 ERLEC1Q96DZ1 483 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 LMLNQ96KR4 655 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 PRMT1Q99873 361 aaKnown RBP16.33■□□□□ 0.2
SERF1B-208ENST00000515588 HINFPQ9BQA5 517 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 IRX2Q9BZI1 471 aaPredicted RBP16.33■□□□□ 0.2
SERF1B-208ENST00000515588 POLMQ9NP87 494 aaPredicted RBP16.33■□□□□ 0.2
SERF1B-208ENST00000515588 ABCB8Q9NUT2 735 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.33■□□□□ 0.2
SERF1B-208ENST00000515588 ELOVL2Q9NXB9 296 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 COX16Q9P0S2 106 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 STIM2Q9P246 746 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 THAP10Q9P2Z0 257 aaPredicted RBP16.33■□□□□ 0.2
SERF1B-208ENST00000515588 NCDNQ9UBB6 729 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 RAB23Q9ULC3 237 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 RAD54BQ9Y620 910 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 SPTBN4Q9H254 2564 aa16.33■□□□□ 0.2
SERF1B-208ENST00000515588 ALDH1A2O94788 518 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 UNGP13051 313 aaPredicted RBP16.32■□□□□ 0.2
SERF1B-208ENST00000515588 MMP8P22894 467 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 CCR1P32246 355 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 CD70P32970 193 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 MATKP42679 507 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 NME3Q13232 169 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 ENPP2Q13822 863 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 FAM102AQ5T9C2 384 aaPredicted RBP16.32■□□□□ 0.2
SERF1B-208ENST00000515588 MMS22LQ6ZRQ5 1243 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 ADIPOR2Q86V24 386 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 CFAP52Q8N1V2 620 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.32■□□□□ 0.2
SERF1B-208ENST00000515588 HJURPQ8NCD3 748 aaPredicted RBP16.32■□□□□ 0.2
SERF1B-208ENST00000515588 OLIG1Q8TAK6 271 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 HMGB4Q8WW32 186 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 BAP1Q92560 729 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 NT5C3BQ969T7 300 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 BTN2A3PQ96KV6 586 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 NPY6RQ99463 290 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 DDX50Q9BQ39 737 aaKnown RBP16.32■□□□□ 0.2
SERF1B-208ENST00000515588 ANLNQ9NQW6 1124 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.32■□□□□ 0.2
SERF1B-208ENST00000515588 TMEM59LQ9UK28 342 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 STON1Q9Y6Q2 735 aa16.32■□□□□ 0.2
SERF1B-208ENST00000515588 DCHS1Q96JQ0 3298 aa16.31■□□□□ 0.2
SERF1B-208ENST00000515588 GOLGA8SH3BPF8 625 aa16.31■□□□□ 0.2
SERF1B-208ENST00000515588 M0QYT0 321 aa16.31■□□□□ 0.2
SERF1B-208ENST00000515588 RETP07949 1114 aa16.31■□□□□ 0.2
SERF1B-208ENST00000515588 PABPC1P11940 636 aaKnown RBP16.31■□□□□ 0.2
SERF1B-208ENST00000515588 GABRG2P18507 467 aa16.31■□□□□ 0.2
SERF1B-208ENST00000515588 TACR2P21452 398 aa16.31■□□□□ 0.2
SERF1B-208ENST00000515588 GBP1P32455 592 aa16.31■□□□□ 0.2
SERF1B-208ENST00000515588 FLT3P36888 993 aa16.31■□□□□ 0.2
SERF1B-208ENST00000515588 IL12RB1P42701 662 aa16.31■□□□□ 0.2
SERF1B-208ENST00000515588 PTP4A2Q12974 167 aa16.31■□□□□ 0.2
SERF1B-208ENST00000515588 ZNF234Q14588 700 aa16.31■□□□□ 0.2
SERF1B-208ENST00000515588 NR1I3Q14994 352 aa16.31■□□□□ 0.2
SERF1B-208ENST00000515588 PLK5Q496M5 336 aa16.31■□□□□ 0.2
SERF1B-208ENST00000515588 USP39Q53GS9 565 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms