RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 LMO1P25800 156 aa5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 PDIA3P30101 505 aaKnown RBP5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 CPA2P48052 419 aa5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 ZNF84P51523 738 aa5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 SLC12A2P55011 1212 aa5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 KLF9Q13886 244 aaPredicted RBP5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 ETFDHQ16134 617 aa5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 Q4G0T1 1027 aa5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 RBM44Q6ZP01 1051 aaKnown RBP5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 CCDC117Q8IWD4 279 aaPredicted RBP5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 RSC1A1Q92681 617 aa5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 ZNF778Q96MU6 729 aa5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 KATNAL1Q9BW62 490 aa5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 BRD8Q9H0E9 1235 aa5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 VPS16Q9H269 839 aa5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 WDR26Q9H7D7 661 aa5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 AGO4Q9HCK5 861 aaKnown RBP5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 KCNK9Q9NPC2 374 aa5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 TRNAU1APQ9NX07 287 aaKnown RBP5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 IPO11Q9UI26 975 aaKnown RBP5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 HERC5Q9UII4 1024 aaKnown RBP5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 B3GNT3Q9Y2A9 372 aa5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 SPATA31A5Q5VU36 1347 aa5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 SPATA31A7Q8IWB4 1347 aa5.46□□□□□ -1.54
SMARCA5-203ENST00000515531 TBC1D3DA0A087WVF3 549 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 TBC1D3IA0A087WXS9 549 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 TBC1D3EA0A087X179 549 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 TBC1D3KA0A087X1G2 549 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 LOC105369274A0A096LPK9 316 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 LOC102723532A0A0G2JNH3 316 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 TBC1D3BA6NDS4 549 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 TBC1D3FA6NER0 549 aaPredicted RBP5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 KIF28PB7ZC32 967 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 TBC1D3LB9A6J9 549 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 SYT5O00445 386 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 NKX2-8O15522 239 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 LARGE1O95461 756 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 TBC1D3HP0C7X1 549 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 RPS6KB1P23443 525 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 GRK5P34947 590 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 IDUAP35475 653 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 BLMHQ13867 455 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 CCDC38Q502W7 563 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 EARS2Q5JPH6 523 aaKnown RBP5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 TBC1D3GQ6DHY5 549 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 TBC1D3CQ6IPX1 549 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 KLHL17Q6TDP4 642 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 UBE2Q1Q7Z7E8 422 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 TBC1D3Q8IZP1 549 aaPredicted RBP5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 OR4N4Q8N0Y3 316 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 NANOGP1Q8N7R0 232 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 ENAHQ8N8S7 591 aaPredicted RBP5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 ADPRHL1Q8NDY3 354 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 BCAS4Q8TDM0 211 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 HMGB4Q8WW32 186 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 EID2BQ96D98 161 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 GPR78Q96P69 363 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 RPS6KC1Q96S38 1066 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 RTKNQ9BST9 563 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 TMEM184CQ9NVA4 438 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 DACT1Q9NYF0 836 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 RAB21Q9UL25 225 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 SLC12A4Q9UP95 1085 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 EMSYQ7Z589 1322 aa5.45□□□□□ -1.54
SMARCA5-203ENST00000515531 EFCAB8A8MWE9 144 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 M0QYT0 321 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 ADAM10O14672 748 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 FGBP02675 491 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 ALDOAP04075 364 aaKnown RBP5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 CSTBP04080 98 aaKnown RBP5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 CTSAP10619 480 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 GYS1P13807 737 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 AKR1A1P14550 325 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 HOXA7P31268 230 aaPredicted RBP5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 SERPINF1P36955 418 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 CFHR1Q03591 330 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 RNASELQ05823 741 aaKnown RBP5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 SF3A3Q12874 501 aaKnown RBP eCLIP5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 TRIM14Q14142 442 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 RABEP1Q15276 862 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 BTBD16Q32M84 506 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 SHC4Q6S5L8 630 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 RFX6Q8HWS3 928 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 ADGRF4Q8IZF3 695 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 PIGOQ8TEQ8 1089 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 TRMT61AQ96FX7 289 aaKnown RBP5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 RMDN3Q96TC7 470 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 ABHD14AQ9BUJ0 271 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 C1QTNF7Q9BXJ2 289 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 LIN7CQ9NUP9 197 aaKnown RBP5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 ZBTB1Q9Y2K1 713 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 COMMD10Q9Y6G5 202 aa5.44□□□□□ -1.54
SMARCA5-203ENST00000515531 SLC22A23A1A5C7 686 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 C3orf70A6NLC5 250 aaPredicted RBP5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 TRIM38O00635 465 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 PPEF2O14830 753 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 PPP6R2O75170 966 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 ACTL6BO94805 426 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 TOP3BO95985 862 aaKnown RBP5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 TFEBP19484 476 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms