RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 RPL34P49207 117 aaKnown RBP14.2□□□□□ -0.14
TCOF1-215ENST00000515516 YWHAZP63104 245 aaKnown RBP14.2□□□□□ -0.14
TCOF1-215ENST00000515516 PTK2Q05397 1052 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 GFPT1Q06210 699 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-215ENST00000515516 ENPP2Q13822 863 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 MAN2A1Q16706 1144 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 WDR45BQ5MNZ6 344 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 PIK3R6Q5UE93 754 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 SMYD5Q6GMV2 418 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 RFWD3Q6PCD5 774 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 SLC23A3Q6PIS1 610 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 BEND5Q7L4P6 421 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 TMEM110Q86TL2 294 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 METTL3Q86U44 580 aaKnown RBP14.2□□□□□ -0.14
TCOF1-215ENST00000515516 MFN1Q8IWA4 741 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 HJURPQ8NCD3 748 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-215ENST00000515516 DQX1Q8TE96 717 aaKnown RBP14.2□□□□□ -0.14
TCOF1-215ENST00000515516 HSPA12BQ96MM6 686 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 NOX5Q96PH1 765 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 NUP62CLQ9H1M0 184 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 POPDC2Q9HBU9 364 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 ITM2CQ9NQX7 267 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 TMEM74BQ9NUR3 256 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 SLC6A14Q9UN76 642 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 DCHS1Q96JQ0 3298 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 E5RJQ4 531 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 PES1O00541 588 aaKnown RBP14.19□□□□□ -0.14
TCOF1-215ENST00000515516 KCNK5O95279 499 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 MOCS2O96007 188 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-215ENST00000515516 SERPINF2P08697 491 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 GNSP15586 552 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 ENGP17813 658 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 PRKCHP24723 683 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 PON1P27169 355 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 ERCC5P28715 1186 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-215ENST00000515516 KRT9P35527 623 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 NOVA1P51513 510 aaKnown RBP14.19□□□□□ -0.14
TCOF1-215ENST00000515516 N4BP2L1Q5TBK1 243 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-215ENST00000515516 PEAR1Q5VY43 1037 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-215ENST00000515516 TMEM215Q68D42 235 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 MBLAC2Q68D91 279 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 PSAPL1Q6NUJ1 521 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 IRF2BP1Q8IU81 584 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.19□□□□□ -0.14
TCOF1-215ENST00000515516 ADAM32Q8TC27 787 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 CYB5D2Q8WUJ1 264 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 TOE1Q96GM8 510 aaKnown RBP14.19□□□□□ -0.14
TCOF1-215ENST00000515516 ZNF419Q96HQ0 510 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-215ENST00000515516 FCRL2Q96LA5 508 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-215ENST00000515516 GTPBP2Q9BX10 602 aaKnown RBP14.19□□□□□ -0.14
TCOF1-215ENST00000515516 MKRN2Q9H000 416 aaKnown RBP14.19□□□□□ -0.14
TCOF1-215ENST00000515516 ACP6Q9NPH0 428 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 TJP2Q9UDY2 1190 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 SUSD2Q9UGT4 822 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 DNAJC12Q9UKB3 198 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 CEP83Q9Y592 693 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 DNAH14Q0VDD8 3507 aa14.19□□□□□ -0.14
TCOF1-215ENST00000515516 MEI4A8MW99 385 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 CDX4O14627 284 aaPredicted RBP14.18□□□□□ -0.14
TCOF1-215ENST00000515516 PAPSS1O43252 624 aaPredicted RBP14.18□□□□□ -0.14
TCOF1-215ENST00000515516 FYNP06241 537 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 SYPP08247 313 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 DLDP09622 509 aaKnown RBP14.18□□□□□ -0.14
TCOF1-215ENST00000515516 SLC6A4P31645 630 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 SGSHP51688 502 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 BPIFB4P59827 614 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 ST8SIA6P61647 398 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 CDK17Q00537 523 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 PDCLQ13371 301 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 CDH18Q13634 790 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 VWA3BQ502W6 1294 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 FAM133BQ5BKY9 247 aaKnown RBP14.18□□□□□ -0.14
TCOF1-215ENST00000515516 EFHC1Q5JVL4 640 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 TAC4Q86UU9 113 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 CARNMT1Q8N4J0 409 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 HDDC3Q8N4P3 179 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 OR2T3Q8NH03 318 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 FIBINQ8TAL6 211 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 SHC3Q92529 594 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 RNF34Q969K3 372 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 PPP1R13BQ96KQ4 1090 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 TUBGCP2Q9BSJ2 902 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 NUP58Q9BVL2 599 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 PDCL3Q9H2J4 239 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 NDST4Q9H3R1 872 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 SYNCQ9H7C4 482 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 FBRSQ9HAH7 460 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 USP36Q9P275 1121 aaKnown RBP14.18□□□□□ -0.14
TCOF1-215ENST00000515516 SUN2Q9UH99 717 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 SDK1Q7Z5N4 2213 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 MYOFQ9NZM1 2061 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 KIAA1549LQ6ZVL6 1849 aa14.18□□□□□ -0.14
TCOF1-215ENST00000515516 BECN2A8MW95 431 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 H0Y626 953 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 MOCS3O95396 460 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 TRUB2O95900 331 aaKnown RBP14.17□□□□□ -0.14
TCOF1-215ENST00000515516 GLI1P08151 1106 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 SLC2A3P11169 496 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 HLA-EP13747 358 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 CD70P32970 193 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms