RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 DCDC2Q9UHG0 476 aa18.03■□□□□ 0.48
SNX2-213ENST00000514949 EMCNQ9ULC0 261 aa18.03■□□□□ 0.48
SNX2-213ENST00000514949 SMIM28A0A1B0GU29 152 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 SMIM35A0A1B0GVV1 85 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 MBLAC1A4D2B0 266 aaPredicted RBP18.02■□□□□ 0.48
SNX2-213ENST00000514949 PPP1R12AO14974 1030 aaPredicted RBP18.02■□□□□ 0.48
SNX2-213ENST00000514949 XPOTO43592 962 aaKnown RBP18.02■□□□□ 0.48
SNX2-213ENST00000514949 GLRA3O75311 464 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 SMNDC1O75940 238 aaKnown RBP eCLIP18.02■□□□□ 0.48
SNX2-213ENST00000514949 PDGFRBP09619 1106 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 FAM163BP0C2L3 166 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 VHLP40337 213 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 AQP5P55064 265 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 KPNB1Q14974 876 aaKnown RBP18.02■□□□□ 0.48
SNX2-213ENST00000514949 PAFAH1B3Q15102 231 aaKnown RBP18.02■□□□□ 0.48
SNX2-213ENST00000514949 PDK1Q15118 436 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 GLRA4Q5JXX5 417 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 OTUD1Q5VV17 481 aaPredicted RBP18.02■□□□□ 0.48
SNX2-213ENST00000514949 MBLAC2Q68D91 279 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 DEFB106AQ8N104 65 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 PYROXD2Q8N2H3 581 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 TNIP3Q96KP6 325 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 NPY6RQ99463 290 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 LGMNQ99538 433 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 FERMT1Q9BQL6 677 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 SNX25Q9H3E2 840 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 NXF3Q9H4D5 531 aaKnown RBP18.02■□□□□ 0.48
SNX2-213ENST00000514949 IGSF9Q9P2J2 1179 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 TAGLN3Q9UI15 199 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 CORO1CQ9ULV4 474 aaPredicted RBP18.02■□□□□ 0.48
SNX2-213ENST00000514949 PLA2G4CQ9UP65 541 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 MFHAS1Q9Y4C4 1052 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 HES2Q9Y543 173 aa18.02■□□□□ 0.48
SNX2-213ENST00000514949 B2RBV5 119 aa18.02■□□□□ 0.47
SNX2-213ENST00000514949 H0Y3Z8 333 aa18.02■□□□□ 0.47
SNX2-213ENST00000514949 H3BRJ5 948 aa18.02■□□□□ 0.47
SNX2-213ENST00000514949 MFSD11O43934 449 aa18.02■□□□□ 0.47
SNX2-213ENST00000514949 PSMG1O95456 288 aa18.02■□□□□ 0.47
SNX2-213ENST00000514949 TSNAXIP1Q2TAA8 658 aa18.02■□□□□ 0.47
SNX2-213ENST00000514949 FASTKD1Q53R41 847 aaKnown RBP18.02■□□□□ 0.47
SNX2-213ENST00000514949 IQSEC1Q6DN90 963 aa18.02■□□□□ 0.47
SNX2-213ENST00000514949 PDCD7Q8N8D1 485 aaKnown RBP18.02■□□□□ 0.47
SNX2-213ENST00000514949 APPL2Q8NEU8 664 aa18.02■□□□□ 0.47
SNX2-213ENST00000514949 DNAJC9Q8WXX5 260 aa18.02■□□□□ 0.47
SNX2-213ENST00000514949 KCTD13Q8WZ19 329 aa18.02■□□□□ 0.47
SNX2-213ENST00000514949 P2RY11Q96G91 374 aa18.02■□□□□ 0.47
SNX2-213ENST00000514949 ZNF395Q9H8N7 513 aaPredicted RBP18.02■□□□□ 0.47
SNX2-213ENST00000514949 CDHR5Q9HBB8 845 aa18.02■□□□□ 0.47
SNX2-213ENST00000514949 PPARGC1AQ9UBK2 798 aaKnown RBP18.02■□□□□ 0.47
SNX2-213ENST00000514949 NRCAMQ92823 1304 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 A6NHS1 94 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 RNF103O00237 685 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 PLIN3O60664 434 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 AOC1P19801 751 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 WARSP23381 471 aaKnown RBP18.01■□□□□ 0.47
SNX2-213ENST00000514949 NOS2P35228 1153 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 PGM1P36871 562 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 TAF6P49848 677 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 SLC34A1Q06495 639 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 PDE1CQ14123 709 aaPredicted RBP18.01■□□□□ 0.47
SNX2-213ENST00000514949 FRG1Q14331 258 aaKnown RBP18.01■□□□□ 0.47
SNX2-213ENST00000514949 USP50Q70EL3 339 aaPredicted RBP18.01■□□□□ 0.47
SNX2-213ENST00000514949 PIGZQ86VD9 579 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 FAM131BQ86XD5 332 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 KIRREL3Q8IZU9 778 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 RNF139Q8WU17 664 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 WDR60Q8WVS4 1066 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 ATP2A3Q93084 1043 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 ISL2Q96A47 359 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 ZNF333Q96JL9 665 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 DUSP16Q9BY84 665 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 ABHD16BQ9H3Z7 469 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 MYO18AQ92614 2054 aaKnown RBP18.01■□□□□ 0.47
SNX2-213ENST00000514949 FGF3P11487 239 aaPredicted RBP18.01■□□□□ 0.47
SNX2-213ENST00000514949 SULT1E1P49888 294 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 DPYSQ14117 519 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 R3HDM1Q15032 1099 aaKnown RBP18.01■□□□□ 0.47
SNX2-213ENST00000514949 SV2CQ496J9 727 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 DNAL1Q4LDG9 190 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 TEDDM1Q5T9Z0 273 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 TOP6BLQ8N6T0 577 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 OR6J1Q8NGC5 347 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 PIWIL2Q8TC59 973 aaKnown RBP18.01■□□□□ 0.47
SNX2-213ENST00000514949 SLC2A13Q96QE2 648 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 SLC9A7Q96T83 725 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 XPNPEP3Q9NQH7 507 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 RAD54BQ9Y620 910 aa18.01■□□□□ 0.47
SNX2-213ENST00000514949 CCDC195A0A1B0GUA6 201 aa18■□□□□ 0.47
SNX2-213ENST00000514949 TM7SF2O76062 418 aa18■□□□□ 0.47
SNX2-213ENST00000514949 TKTP29401 623 aaKnown RBP18■□□□□ 0.47
SNX2-213ENST00000514949 AIF1P55008 147 aa18■□□□□ 0.47
SNX2-213ENST00000514949 TUBB3Q13509 450 aa18■□□□□ 0.47
SNX2-213ENST00000514949 RCN1Q15293 331 aa18■□□□□ 0.47
SNX2-213ENST00000514949 NET1Q7Z628 596 aaPredicted RBP18■□□□□ 0.47
SNX2-213ENST00000514949 WDR75Q8IWA0 830 aaKnown RBP18■□□□□ 0.47
SNX2-213ENST00000514949 UNC5BQ8IZJ1 945 aa18■□□□□ 0.47
SNX2-213ENST00000514949 RBM15BQ8NDT2 890 aaKnown RBP18■□□□□ 0.47
SNX2-213ENST00000514949 TRIM6Q9C030 488 aaPredicted RBP18■□□□□ 0.47
SNX2-213ENST00000514949 SUFUQ9UMX1 484 aa18■□□□□ 0.47
SNX2-213ENST00000514949 TSC2P49815 1807 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms