RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 PNKPQ96T60 521 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 BBS2Q9BXC9 721 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 OLA1Q9NTK5 396 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 MARK1Q9P0L2 795 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 FBXO4Q9UKT5 387 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 HCN2Q9UL51 889 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 STRIP2Q9ULQ0 834 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 CLEC4EQ9ULY5 219 aa11.49□□□□□ -0.57
UBE2D3-232ENST00000514755 FANCMQ8IYD8 2048 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 GOLGA6L7A0A1B0GV03 622 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 GRAP2O75791 330 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 KAT7O95251 611 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 IGLV3-27P01718 113 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 TYRP14679 529 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 CHRNB2P17787 502 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 CDH5P33151 784 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 SOX5P35711 763 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 CXCL12P48061 93 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 CCR3P51677 355 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 CRTC2Q53ET0 693 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 FYB2Q5VWT5 728 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 TAC4Q86UU9 113 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 NEK11Q8NG66 645 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 NELL1Q92832 810 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 PLD4Q96BZ4 506 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 IER2Q9BTL4 223 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 IRF2BPLQ9H1B7 796 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 ARHGEF4Q9NR80 690 aa11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 DNAAF2Q9NVR5 837 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 NOCTQ9UK39 431 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 HBS1LQ9Y450 684 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-232ENST00000514755 A0A0A0MRY4 1105 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 CHURC1-FNTBB4DL54 471 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 CACNG3O60359 315 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 CISD3P0C7P0 127 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 PTMSP20962 102 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 EIF2DP41214 584 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 PTGIRP43119 386 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 SGSHP51688 502 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 BPIFB4P59827 614 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 YWHAZP63104 245 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 NOMO3P69849 1222 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 FMO1Q01740 532 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 C2orf27AQ580R0 203 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 OR6B2Q6IFH4 312 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 MRPL14Q6P1L8 145 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 OLFML1Q6UWY5 402 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 ASCL5Q7RTU5 278 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 FAM217AQ8IXS0 508 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 DEFB106AQ8N104 65 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 LINC00528Q8N1L1 170 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 ZBTB44Q8NCP5 570 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 USP33Q8TEY7 942 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 GOLGA1Q92805 767 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 MYEOVQ96EZ4 313 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 SLC39A13Q96H72 371 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 FCRL2Q96LA5 508 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 SPAG5Q96R06 1193 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 PCDHB18PQ96TA0 734 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 DCLK3Q9C098 648 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 PDCL3Q9H2J4 239 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 POPDC2Q9HBU9 364 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 DNAJC17Q9NVM6 304 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 XPO7Q9UIA9 1087 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 ZNF510Q9Y2H8 683 aa11.47□□□□□ -0.57
UBE2D3-232ENST00000514755 A0A1B0GTH6 734 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 PRRT4C9JH25 899 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 PROB1E7EW31 1015 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 GFRA2O00451 464 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 CAPN9O14815 690 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 SART1O43290 800 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 TSPAN3O60637 253 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 DKK1O94907 266 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 PAPSS2O95340 614 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 PENKP01210 267 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 IGLV3-25P01717 112 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 CYP1A1P04798 512 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 APODP05090 189 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 HNRNPLP14866 589 aaKnown RBP eCLIP11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 SLC6A4P31645 630 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 CHKAP35790 457 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 STAT1P42224 750 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 GRIA2P42262 883 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 KIR2DL1P43626 348 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 PXNP49023 591 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 FNTBP49356 437 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 HARS2P49590 506 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 MRE11P49959 708 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 TBX4P57082 545 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 ARID5AQ03989 594 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 SRSF5Q13243 272 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 EIF4EBP2Q13542 120 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 ELOAQ14241 798 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 NR1I3Q14994 352 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 NFKBIBQ15653 356 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 ZNF528Q3MIS6 628 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 FBXO43Q4G163 708 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 FAM133BQ5BKY9 247 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 NAA35Q5VZE5 725 aa11.46□□□□□ -0.57
UBE2D3-232ENST00000514755 HEATR6Q6AI08 1181 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms