RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 PRR11Q96HE9 360 aaPredicted RBP5.69□□□□□ -1.5
RFC1-216ENST00000514572 LENG8Q96PV6 779 aaPredicted RBP5.69□□□□□ -1.5
RFC1-216ENST00000514572 PRR25Q96S07 402 aa5.69□□□□□ -1.5
RFC1-216ENST00000514572 EIF3CQ99613 913 aaKnown RBP5.69□□□□□ -1.5
RFC1-216ENST00000514572 NUDT16L1Q9BRJ7 211 aaKnown RBP5.69□□□□□ -1.5
RFC1-216ENST00000514572 XYLT2Q9H1B5 865 aa5.69□□□□□ -1.5
RFC1-216ENST00000514572 CDCP1Q9H5V8 836 aa5.69□□□□□ -1.5
RFC1-216ENST00000514572 SAP30LQ9HAJ7 183 aa5.69□□□□□ -1.5
RFC1-216ENST00000514572 BRF2Q9HAW0 419 aa5.69□□□□□ -1.5
RFC1-216ENST00000514572 SEMA4BQ9NPR2 832 aaPredicted RBP5.69□□□□□ -1.5
RFC1-216ENST00000514572 TLR8Q9NR97 1041 aaKnown RBP5.69□□□□□ -1.5
RFC1-216ENST00000514572 ANKEF1Q9NU02 776 aa5.69□□□□□ -1.5
RFC1-216ENST00000514572 TBC1D29Q9UFV1 150 aa5.69□□□□□ -1.5
RFC1-216ENST00000514572 CNOT7Q9UIV1 285 aaKnown RBP5.69□□□□□ -1.5
RFC1-216ENST00000514572 TOP2AP11388 1531 aaKnown RBP5.69□□□□□ -1.5
RFC1-216ENST00000514572 TMEM200CA6NKL6 621 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 GRM8O00222 908 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 TNFSF14O43557 240 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 SPDEFO95238 335 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 TNNT1P13805 278 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 PSMA4P25789 261 aaKnown RBP5.68□□□□□ -1.5
RFC1-216ENST00000514572 DDX6P26196 483 aaKnown RBP eCLIP5.68□□□□□ -1.5
RFC1-216ENST00000514572 ACRV1P26436 265 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 GRK5P34947 590 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 RPP30P78346 268 aaKnown RBP5.68□□□□□ -1.5
RFC1-216ENST00000514572 SETQ01105 290 aaPredicted RBP5.68□□□□□ -1.5
RFC1-216ENST00000514572 RNASELQ05823 741 aaKnown RBP5.68□□□□□ -1.5
RFC1-216ENST00000514572 EIF2B5Q13144 721 aaKnown RBP5.68□□□□□ -1.5
RFC1-216ENST00000514572 EIF4A2Q14240 407 aaKnown RBP5.68□□□□□ -1.5
RFC1-216ENST00000514572 TBCEQ15813 527 aaPredicted RBP5.68□□□□□ -1.5
RFC1-216ENST00000514572 CCNG2Q16589 344 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 TREML2Q5T2D2 321 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 PXKQ7Z7A4 578 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 TMPRSS6Q8IU80 811 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 ADSSL1Q8N142 457 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 PNPLA1Q8N8W4 532 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 B3GALNT2Q8NCR0 500 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 OR52L2PQ8NGH6 319 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 ZCCHC10Q8TBK6 192 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 FKBP10Q96AY3 582 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 NSUN4Q96CB9 384 aaKnown RBP5.68□□□□□ -1.5
RFC1-216ENST00000514572 VPS50Q96JG6 964 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 NR1H4Q96RI1 486 aaPredicted RBP5.68□□□□□ -1.5
RFC1-216ENST00000514572 ITPAQ9BY32 194 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 KRT84Q9NSB2 600 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 BEX4Q9NWD9 120 aaPredicted RBP5.68□□□□□ -1.5
RFC1-216ENST00000514572 SLC12A4Q9UP95 1085 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 COPG1Q9Y678 874 aaKnown RBP5.68□□□□□ -1.5
RFC1-216ENST00000514572 PIAS3Q9Y6X2 628 aa5.68□□□□□ -1.5
RFC1-216ENST00000514572 RSF1Q96T23 1441 aaPredicted RBP5.67□□□□□ -1.5
RFC1-216ENST00000514572 TBC1D3DA0A087WVF3 549 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 TBC1D3IA0A087WXS9 549 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 TBC1D3EA0A087X179 549 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 TBC1D3KA0A087X1G2 549 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 GOLGA6L10A0A0M3HER8 536 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 TBC1D3BA6NDS4 549 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 TBC1D3FA6NER0 549 aaPredicted RBP5.67□□□□□ -1.5
RFC1-216ENST00000514572 GAGE10A6NGK3 116 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 SH2D7A6NKC9 451 aaPredicted RBP5.67□□□□□ -1.5
RFC1-216ENST00000514572 C3orf70A6NLC5 250 aaPredicted RBP5.67□□□□□ -1.5
RFC1-216ENST00000514572 TBC1D3LB9A6J9 549 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 PSMD9O00233 223 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 TCERG1O14776 1098 aaKnown RBP5.67□□□□□ -1.5
RFC1-216ENST00000514572 CA12O43570 354 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 PRICKLE3O43900 615 aaPredicted RBP5.67□□□□□ -1.5
RFC1-216ENST00000514572 ONECUT2O95948 504 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 TBC1D3HP0C7X1 549 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 PEPDP12955 493 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 CTGFP29279 349 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 HOXD12P35452 270 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 IGHMBP2P38935 993 aaKnown RBP5.67□□□□□ -1.5
RFC1-216ENST00000514572 GPD2P43304 727 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 CRHR2Q13324 411 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 ICAM4Q14773 271 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 SF3B3Q15393 1217 aaKnown RBP5.67□□□□□ -1.5
RFC1-216ENST00000514572 TBC1D3GQ6DHY5 549 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 TBC1D3CQ6IPX1 549 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 GLB1LQ6UWU2 654 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 KRT77Q7Z794 578 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 DIS3L2Q8IYB7 885 aaKnown RBP5.67□□□□□ -1.5
RFC1-216ENST00000514572 TBC1D3Q8IZP1 549 aaPredicted RBP5.67□□□□□ -1.5
RFC1-216ENST00000514572 RFKQ969G6 155 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 MYEOVQ96EZ4 313 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 CLSTN3Q9BQT9 956 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 SDF4Q9BRK5 362 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 ALG8Q9BVK2 526 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 INTS2Q9H0H0 1204 aaKnown RBP5.67□□□□□ -1.5
RFC1-216ENST00000514572 CCDC68Q9H2F9 335 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 PDE11AQ9HCR9 933 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 PLSCR4Q9NRQ2 329 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 AURKAIP1Q9NWT8 199 aaPredicted RBP5.67□□□□□ -1.5
RFC1-216ENST00000514572 PPP1R14DQ9NXH3 145 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 TAS2R10Q9NYW0 307 aa5.67□□□□□ -1.5
RFC1-216ENST00000514572 ZNF608Q9ULD9 1512 aaPredicted RBP5.67□□□□□ -1.5
RFC1-216ENST00000514572 ARID1BQ8NFD5 2236 aaPredicted RBP5.67□□□□□ -1.5
RFC1-216ENST00000514572 CHD1O14646 1710 aa5.66□□□□□ -1.5
RFC1-216ENST00000514572 NPIPB15A6NHN6 443 aaPredicted RBP5.66□□□□□ -1.5
RFC1-216ENST00000514572 TNPO2O14787 897 aaKnown RBP5.66□□□□□ -1.5
RFC1-216ENST00000514572 NDUFA10O95299 355 aa5.66□□□□□ -1.5
RFC1-216ENST00000514572 ACADMP11310 421 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms