RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 AFF4Q9UHB7 1163 aaKnown RBP13.28□□□□□ -0.28
PVT1-203ENST00000513868 SHOC2Q9UQ13 582 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 TCRBV7S3A2A0A539 114 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 RIPK2O43353 540 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 OPA1O60313 960 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 RNF40O75150 1001 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 GJB5O95377 273 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 SHBGP04278 402 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 VAV1P15498 845 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 CCR1P32246 355 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 PSEN1P49768 467 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 ZNF135P52742 658 aaPredicted RBP13.27□□□□□ -0.29
PVT1-203ENST00000513868 TPI1P60174 286 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 GAD2Q05329 585 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 PRKD1Q15139 912 aaPredicted RBP13.27□□□□□ -0.29
PVT1-203ENST00000513868 TTMPQ5BVD1 217 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 TRMT10CQ7L0Y3 403 aaKnown RBP13.27□□□□□ -0.29
PVT1-203ENST00000513868 CDKL3Q8IVW4 592 aaPredicted RBP13.27□□□□□ -0.29
PVT1-203ENST00000513868 RNF34Q969K3 372 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 CEP295NLQ96MC4 621 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 SERPINB11Q96P15 392 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 YME1L1Q96TA2 773 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 DNAJC17Q9NVM6 304 aaKnown RBP13.27□□□□□ -0.29
PVT1-203ENST00000513868 HSFX1Q9UBD0 423 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 TLR6Q9Y2C9 796 aa13.27□□□□□ -0.29
PVT1-203ENST00000513868 GBF1Q92538 1859 aa13.26□□□□□ -0.29
PVT1-203ENST00000513868 HACD1B0YJ81 288 aa13.26□□□□□ -0.29
PVT1-203ENST00000513868 POLR3GO15318 223 aaPredicted RBP13.26□□□□□ -0.29
PVT1-203ENST00000513868 LILRB3O75022 631 aa13.26□□□□□ -0.29
PVT1-203ENST00000513868 PAGE1O75459 146 aa13.26□□□□□ -0.29
PVT1-203ENST00000513868 GCATO75600 419 aa13.26□□□□□ -0.29
PVT1-203ENST00000513868 TBX18O95935 607 aa13.26□□□□□ -0.29
PVT1-203ENST00000513868 FGBP02675 491 aa13.26□□□□□ -0.29
PVT1-203ENST00000513868 TUFMP49411 452 aaKnown RBP13.26□□□□□ -0.29
PVT1-203ENST00000513868 MANEALQ5VSG8 457 aa13.26□□□□□ -0.29
PVT1-203ENST00000513868 TPGS2Q68CL5 300 aa13.26□□□□□ -0.29
PVT1-203ENST00000513868 PCGF5Q86SE9 256 aa13.26□□□□□ -0.29
PVT1-203ENST00000513868 PPIL6Q8IXY8 311 aa13.26□□□□□ -0.29
PVT1-203ENST00000513868 TAB3Q8N5C8 712 aaPredicted RBP13.26□□□□□ -0.29
PVT1-203ENST00000513868 NPWQ8N729 165 aa13.26□□□□□ -0.29
PVT1-203ENST00000513868 FCRL2Q96LA5 508 aaPredicted RBP13.26□□□□□ -0.29
PVT1-203ENST00000513868 RBM15Q96T37 977 aaKnown RBP eCLIP13.26□□□□□ -0.291e-8■■■■□ 24.6
PVT1-203ENST00000513868 RUFY1Q96T51 708 aa13.26□□□□□ -0.29
PVT1-203ENST00000513868 LGMNQ99538 433 aa13.26□□□□□ -0.29
PVT1-203ENST00000513868 TLR8Q9NR97 1041 aaKnown RBP13.26□□□□□ -0.29
PVT1-203ENST00000513868 CXXC1Q9P0U4 656 aaPredicted RBP13.26□□□□□ -0.29
PVT1-203ENST00000513868 XPO7Q9UIA9 1087 aaKnown RBP13.26□□□□□ -0.29
PVT1-203ENST00000513868 NR2E3Q9Y5X4 410 aa13.26□□□□□ -0.29
PVT1-203ENST00000513868 CHD5Q8TDI0 1954 aa13.26□□□□□ -0.29
PVT1-203ENST00000513868 C5orf60A6NFR6 353 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 TMEM63AO94886 807 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 TTC4O95801 387 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 HMGA1P17096 107 aaKnown RBP13.25□□□□□ -0.29
PVT1-203ENST00000513868 HOXC13P31276 330 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 GYS2P54840 703 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 PPIGQ13427 754 aaKnown RBP eCLIP13.25□□□□□ -0.295e-7■■□□□ 12.9
PVT1-203ENST00000513868 RAB33AQ14088 237 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 KCNJ11Q14654 390 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 TMEM240Q5SV17 173 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 CEP85LQ5SZL2 805 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 BZW1Q7L1Q6 419 aaKnown RBP13.25□□□□□ -0.29
PVT1-203ENST00000513868 HOOK3Q86VS8 718 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 VPS52Q8N1B4 723 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 TFB1MQ8WVM0 346 aaKnown RBP13.25□□□□□ -0.29
PVT1-203ENST00000513868 AUTS2Q8WXX7 1259 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 EPAS1Q99814 870 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 UBE2OQ9C0C9 1292 aaKnown RBP13.25□□□□□ -0.29
PVT1-203ENST00000513868 KLC2Q9H0B6 622 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 PRDM12Q9H4Q4 367 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 TMBIM4Q9HC24 238 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 NINJ2Q9NZG7 142 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 PAK5Q9P286 719 aa13.25□□□□□ -0.29
PVT1-203ENST00000513868 CARNS1A5YM72 827 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 ZBBXA8MT70 800 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 GOLGA8KD6RF30 607 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 NDC80O14777 642 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 EPHB2P29323 1055 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 NRG1Q02297 640 aaPredicted RBP13.24□□□□□ -0.29
PVT1-203ENST00000513868 FPGSQ05932 587 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 EFEMP1Q12805 493 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 PDK1Q15118 436 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 KYNUQ16719 465 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 DENND2CQ68D51 928 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 CCDC110Q8TBZ0 833 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 SIK2Q9H0K1 926 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 TMEM51Q9NW97 253 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 VPS18Q9P253 973 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 RAD54BQ9Y620 910 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 HS3ST4Q9Y661 456 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 DOCK6Q96HP0 2047 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 GOLGA8MH3BSY2 632 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 METTL18O95568 372 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 IGLV3-27P01718 113 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 URODP06132 367 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 PPM1AP35813 382 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 MAGEA4P43358 317 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 MAGEA6P43360 314 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 MLLT6P55198 1093 aaPredicted RBP13.24□□□□□ -0.29
PVT1-203ENST00000513868 EIF3BP55884 814 aaKnown RBP13.24□□□□□ -0.29
PVT1-203ENST00000513868 TBX4P57082 545 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms