RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 CD72P21854 359 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 ARHGAP25P42331 645 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 SLC6A11P48066 632 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 NAP1L1P55209 391 aaKnown RBP11.74□□□□□ -0.53
HTT-213ENST00000513806 KRT83P78385 493 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 RING1Q06587 406 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 MESP2Q0VG99 397 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 NNTQ13423 1086 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 RUNX3Q13761 415 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 PPP2R5DQ14738 602 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 DHCR24Q15392 516 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 GAB4Q2WGN9 574 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 ANO4Q32M45 955 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 ATP13A4Q4VNC1 1196 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 ARHGAP29Q52LW3 1261 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 KCNT1Q5JUK3 1230 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 ARTNQ5T4W7 220 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 NUGGCQ68CJ6 796 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 SND1Q7KZF4 910 aaKnown RBP eCLIP11.74□□□□□ -0.53
HTT-213ENST00000513806 SFTPA1Q8IWL2 248 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 UNC45BQ8IWX7 931 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 ADGRG2Q8IZP9 1017 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 LGI2Q8N0V4 545 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 ATP6V0D2Q8N8Y2 350 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 IGSF8Q969P0 613 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 SNRNP25Q9BV90 132 aaKnown RBP11.74□□□□□ -0.53
HTT-213ENST00000513806 DCLK3Q9C098 648 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 ECT2Q9H8V3 914 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 LZTFL1Q9NQ48 299 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.74□□□□□ -0.53
HTT-213ENST00000513806 THG1LQ9NWX6 298 aaKnown RBP11.74□□□□□ -0.53
HTT-213ENST00000513806 STIM2Q9P246 746 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 IP6K2Q9UHH9 426 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 VANGL2Q9ULK5 521 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 PPP2R2CQ9Y2T4 447 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 BDP1A6H8Y1 2624 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 USP27XA6NNY8 438 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 NEDD8-MDP1E9PL57 170 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 TBL1XO60907 577 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 TECTAO75443 2155 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 MTA2O94776 668 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 F9P00740 461 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 SRFP11831 508 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 ADRA1BP35368 520 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 SLC11A2P49281 568 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 KPNA1P52294 538 aaPredicted RBP11.73□□□□□ -0.53
HTT-213ENST00000513806 RPS24P62847 133 aaKnown RBP11.73□□□□□ -0.53
HTT-213ENST00000513806 SLC25A11Q02978 314 aaKnown RBP11.73□□□□□ -0.53
HTT-213ENST00000513806 AUHQ13825 339 aaKnown RBP11.73□□□□□ -0.53
HTT-213ENST00000513806 TXNDC11Q6PKC3 985 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 RHOT2Q8IXI1 618 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 C17orf53Q8N3J3 647 aaPredicted RBP11.73□□□□□ -0.53
HTT-213ENST00000513806 TPCN2Q8NHX9 752 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 WFDC5Q8TCV5 224 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 CSGALNACT1Q8TDX6 532 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 FNIP1Q8TF40 1166 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 SHROOM3Q8TF72 1996 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 HSPH1Q92598 858 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 IRF7Q92985 503 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 NXPE3Q969Y0 559 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 BTN2A3PQ96KV6 586 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 PRMT1Q99873 361 aaKnown RBP11.73□□□□□ -0.53
HTT-213ENST00000513806 SPHK2Q9NRA0 654 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 TRMT1Q9NXH9 659 aaKnown RBP11.73□□□□□ -0.53
HTT-213ENST00000513806 FZD10Q9ULW2 581 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 GUCA1BQ9UMX6 200 aa11.73□□□□□ -0.53
HTT-213ENST00000513806 F5P12259 2224 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 NYNRINQ9P2P1 1898 aaKnown RBP11.72□□□□□ -0.53
HTT-213ENST00000513806 GRID2IPA4D2P6 1211 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 KRBA1A5PL33 1030 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 SHISA7A6NL88 538 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 SRGAP2O75044 1071 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 RNF8O76064 485 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 CNTN5O94779 1100 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 NFATC1O95644 943 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 ADH5P11766 374 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 COMTP21964 271 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 GJA4P35212 333 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 MARCKSL1P49006 195 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 KDSRQ06136 332 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 KIF5AQ12840 1032 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 PIGHQ14442 188 aaPredicted RBP11.72□□□□□ -0.53
HTT-213ENST00000513806 PDGFRLQ15198 375 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 ITPRIPL2Q3MIP1 535 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 BRMS1LQ5PSV4 323 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 ADGRF1Q5T601 910 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 FYB2Q5VWT5 728 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 ASTLQ6HA08 431 aaPredicted RBP11.72□□□□□ -0.53
HTT-213ENST00000513806 FBXL22Q6P050 247 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 TPRG1Q6ZUI0 275 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 SLFN11Q7Z7L1 901 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 FAM217AQ8IXS0 508 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 ZNF683Q8IZ20 524 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 NIPA2Q8N8Q9 360 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 NETO2Q8NC67 525 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 DDI1Q8WTU0 396 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 ATP2A3Q93084 1043 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 KCTD15Q96SI1 283 aaPredicted RBP11.72□□□□□ -0.53
HTT-213ENST00000513806 BBS2Q9BXC9 721 aa11.72□□□□□ -0.53
HTT-213ENST00000513806 IRX2Q9BZI1 471 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms