RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 RSPRY1Q96DX4 576 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 CALR3Q96L12 384 aaKnown RBP7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 FCRL2Q96LA5 508 aaPredicted RBP7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 TSGA10Q9BZW7 698 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 TRIM7Q9C029 511 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 KCNF1Q9H3M0 494 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 KCNK12Q9HB15 430 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 OSGEPQ9NPF4 335 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 GKN1Q9NS71 199 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 PIGVQ9NUD9 493 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 THG1LQ9NWX6 298 aaKnown RBP7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 COX16Q9P0S2 106 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 IP6K2Q9UHH9 426 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 ZNF510Q9Y2H8 683 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 CKAP5Q14008 2032 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 KRT86O43790 486 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 GREM1O60565 184 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 MAN1A1P33908 653 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 CHKAP35790 457 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 ARHGAP25P42331 645 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 SLC11A2P49281 568 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 CXCR3P49682 368 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 AIF1P55008 147 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 HDAC4P56524 1084 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 GRM2Q14416 872 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 PDGFRLQ15198 375 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 IFI16Q16666 785 aaKnown RBP7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 ARL13BQ3SXY8 428 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 ZC3H12AQ5D1E8 599 aaKnown RBP7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 ACBD5Q5T8D3 534 aaPredicted RBP7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 FAM131BQ86XD5 332 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 DENND1CQ8IV53 801 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 FAM217AQ8IXS0 508 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 OSCP1Q8WVF1 389 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 IRF7Q92985 503 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 ATP2A3Q93084 1043 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 RNF34Q969K3 372 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 WBP2Q969T9 261 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 AZIN2Q96A70 460 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 NTAN1Q96AB6 310 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 THAP11Q96EK4 314 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 BTN2A3PQ96KV6 586 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 LRRC3BQ96PB8 259 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 DDX50Q9BQ39 737 aaKnown RBP7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 RPP25Q9BUL9 199 aaKnown RBP7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 TRMT61BQ9BVS5 477 aaKnown RBP7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 PLA2G2FQ9BZM2 168 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 LACRTQ9GZZ8 138 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 TKTL2Q9H0I9 626 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 WDCPQ9H6R7 721 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 ARHGEF38Q9NXL2 777 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 CALCOCO1Q9P1Z2 691 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 LIMD1Q9UGP4 676 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 SLC12A6Q9UHW9 1150 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 TFR2Q9UP52 801 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 SORCS3Q9UPU3 1222 aa7.87□□□□□ -1.15
HMGXB3-204ENST00000513318 TECTAO75443 2155 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 KCNU1A8MYU2 1149 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 PRPSAP2O60256 369 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 ACSL4O60488 711 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 LRCH4O75427 683 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 PROSCO94903 275 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 NFATC1O95644 943 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 MOCS2O96007 188 aaPredicted RBP7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 KLKB1P03952 638 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 ASGR2P07307 311 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 SRFP11831 508 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 GDI1P31150 447 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 PCK1P35558 622 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 NOP2P46087 812 aaKnown RBP7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 ATXN1P54253 815 aaKnown RBP7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 SCAPQ12770 1279 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 TDGQ13569 410 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 MESDQ14696 234 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 EML3Q32P44 896 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 ADGRF1Q5T601 910 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 SH3PXD2AQ5TCZ1 1133 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 C11orf63Q6NUN7 778 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 ZNF662Q6ZS27 426 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 BBS7Q8IWZ6 715 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 GJD3Q8N144 294 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 CPXM2Q8N436 756 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 SLC44A3Q8N4M1 653 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 CPA6Q8N4T0 437 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 ST13P5Q8NFI4 369 aaPredicted RBP7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 RSAD2Q8WXG1 361 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 DNASE1L2Q92874 299 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 ASIC4Q96FT7 647 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 BTBD6Q96KE9 485 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 ZNF830Q96NB3 372 aaPredicted RBP7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 FAM83CQ9BQN1 747 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 IRX2Q9BZI1 471 aaPredicted RBP7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 BRD9Q9H8M2 597 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 TRPV5Q9NQA5 729 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 DUS2Q9NX74 493 aaKnown RBP7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 STOML2Q9UJZ1 356 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 AGO1Q9UL18 857 aaKnown RBP7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 USP18Q9UMW8 372 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 DUSP12Q9UNI6 340 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 PPP2R2CQ9Y2T4 447 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms