RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ZNF77Q15935 545 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 CA9Q16790 459 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 LEXMQ3ZCV2 418 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 ACBD5Q5T8D3 534 aaPredicted RBP12.98□□□□□ -0.33
PDPN-210ENST00000513143 PAPD7Q5XG87 772 aaKnown RBP12.98□□□□□ -0.33
PDPN-210ENST00000513143 Q6ZNB5 142 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 CELF5Q8N6W0 485 aaKnown RBP12.98□□□□□ -0.33
PDPN-210ENST00000513143 KIAA1958Q8N8K9 716 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 EXD1Q8NHP7 514 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 FAM71BQ8TC56 605 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 ACSF2Q96CM8 615 aaPredicted RBP12.98□□□□□ -0.33
PDPN-210ENST00000513143 MAGEB5Q9BZ81 275 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.98□□□□□ -0.33
PDPN-210ENST00000513143 GPATCH2LQ9NWQ4 482 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 CFAP97Q9P2B7 532 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 XPO7Q9UIA9 1087 aaKnown RBP12.98□□□□□ -0.33
PDPN-210ENST00000513143 STOML2Q9UJZ1 356 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 LSM7Q9UK45 103 aaKnown RBP12.98□□□□□ -0.33
PDPN-210ENST00000513143 AGO1Q9UL18 857 aaKnown RBP12.98□□□□□ -0.33
PDPN-210ENST00000513143 ZNF510Q9Y2H8 683 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 DOCK4Q8N1I0 1966 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 C3orf70A6NLC5 250 aaPredicted RBP12.97□□□□□ -0.33
PDPN-210ENST00000513143 ACSL4O60488 711 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 ZRANB2O95218 330 aaKnown RBP eCLIP12.97□□□□□ -0.33
PDPN-210ENST00000513143 KRT1P04264 644 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 LAMP2P13473 410 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 PRLRP16471 622 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 KDELR1P24390 212 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 L1CAMP32004 1257 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 GBP2P32456 591 aaPredicted RBP12.97□□□□□ -0.33
PDPN-210ENST00000513143 DNA2P51530 1060 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 SEMA3BQ13214 749 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 PDK2Q15119 407 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 MS4A13Q5J8X5 152 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 PIK3R6Q5UE93 754 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 DCAF12L1Q5VU92 463 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 NADSYN1Q6IA69 706 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 OTOP3Q7RTS5 596 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 VSIG1Q86XK7 387 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 DENND1CQ8IV53 801 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 RCOR2Q8IZ40 523 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 PYROXD2Q8N2H3 581 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 KCTD6Q8NC69 237 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 MAFAQ8NHW3 353 aaPredicted RBP12.97□□□□□ -0.33
PDPN-210ENST00000513143 RIN3Q8TB24 985 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 RAPGEF5Q92565 580 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 KCTD15Q96SI1 283 aaPredicted RBP12.97□□□□□ -0.33
PDPN-210ENST00000513143 PRMT1Q99873 361 aaKnown RBP12.97□□□□□ -0.33
PDPN-210ENST00000513143 CARD9Q9H257 536 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 DHX35Q9H5Z1 703 aaKnown RBP12.97□□□□□ -0.33
PDPN-210ENST00000513143 OBP2AQ9NY56 170 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 OR12D3Q9UGF7 316 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 SNX12Q9UMY4 172 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 SH3BP1Q9Y3L3 701 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 HS3ST4Q9Y661 456 aa12.97□□□□□ -0.33
PDPN-210ENST00000513143 KIF26AQ9ULI4 1882 aaPredicted RBP12.97□□□□□ -0.33
PDPN-210ENST00000513143 LRRD1A4D1F6 860 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 ZNF487B1APH4 448 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 PI4K2BG5E9Z4 385 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 KCNK3O14649 394 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 FCARP24071 287 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 VIPR2P41587 438 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 ZNF135P52742 658 aaPredicted RBP12.96□□□□□ -0.33
PDPN-210ENST00000513143 CDH6P55285 790 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 COPS2P61201 443 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 TAZQ16635 292 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 FAM133BQ5BKY9 247 aaKnown RBP12.96□□□□□ -0.33
PDPN-210ENST00000513143 ZFYVE27Q5T4F4 411 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 ARTNQ5T4W7 220 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 ADGRF1Q5T601 910 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 MAP7D3Q8IWC1 876 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 FAM217AQ8IXS0 508 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 TSC1Q92574 1164 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 RSPRY1Q96DX4 576 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 RBM41Q96IZ5 413 aaKnown RBP12.96□□□□□ -0.33
PDPN-210ENST00000513143 LRRC3BQ96PB8 259 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 SIK2Q9H0K1 926 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 PCDH18Q9HCL0 1135 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 ZFP14Q9HCL3 533 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 KLHL11Q9NVR0 708 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 RCOR3Q9P2K3 495 aaPredicted RBP12.96□□□□□ -0.33
PDPN-210ENST00000513143 EPS15L1Q9UBC2 864 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 SNX10Q9Y5X0 201 aa12.96□□□□□ -0.33
PDPN-210ENST00000513143 GOLGA6L7A0A1B0GV03 622 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 FAM72CH0Y354 149 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 CES2O00748 559 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 CD48P09326 243 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 PYGMP11217 842 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 TCP1P17987 556 aaKnown RBP12.95□□□□□ -0.34
PDPN-210ENST00000513143 IL4RP24394 825 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 HTR7P34969 479 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 CDKN2BP42772 138 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 HCAR3P49019 387 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 AMPD2Q01433 879 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 AUHQ13825 339 aaKnown RBP12.95□□□□□ -0.34
PDPN-210ENST00000513143 DPYSL3Q14195 570 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 KRT81Q14533 505 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 SMAD2Q15796 467 aaKnown RBP12.95□□□□□ -0.34
PDPN-210ENST00000513143 PUS10Q3MIT2 529 aaKnown RBP12.95□□□□□ -0.34
PDPN-210ENST00000513143 ODF2Q5BJF6 829 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms