RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 CEBPBP17676 345 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 KDELR1P24390 212 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 WEE1P30291 646 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 CORO1AP31146 461 aaKnown RBP11.24□□□□□ -0.61
PFDN1-204ENST00000512707 MARCKSL1P49006 195 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 TPI1P60174 286 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 EIF4EBP2Q13542 120 aaPredicted RBP11.24□□□□□ -0.61
PFDN1-204ENST00000512707 TFDP2Q14188 446 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 COL19A1Q14993 1142 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 PPP2R5EQ16537 467 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 WHAMMP3Q1A5X7 153 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 RAB6CQ53S08 254 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 SPOCD1Q6ZMY3 1216 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 GET4Q7L5D6 327 aaPredicted RBP11.24□□□□□ -0.61
PFDN1-204ENST00000512707 TTC16Q8NEE8 873 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 MNS1Q8NEH6 495 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 AZIN2Q96A70 460 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 ACSF2Q96CM8 615 aaPredicted RBP11.24□□□□□ -0.61
PFDN1-204ENST00000512707 C1orf74Q96LT6 269 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 CYP2S1Q96SQ9 504 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 ZNF670Q9BS34 389 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 SLC46A2Q9BY10 475 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 ADAM33Q9BZ11 813 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 RNF38Q9H0F5 515 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 SIK2Q9H0K1 926 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 RAB6CQ9H0N0 254 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 TDP1Q9NUW8 608 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 GPATCH2LQ9NWQ4 482 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 CLEC1BQ9P126 229 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 CALCOCO1Q9P1Z2 691 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 CFAP97Q9P2B7 532 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 THEGQ9P2T0 379 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 OR12D3Q9UGF7 316 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 CDC23Q9UJX2 597 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 EFR3BQ9Y2G0 817 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 ZFP37Q9Y6Q3 630 aaPredicted RBP11.24□□□□□ -0.61
PFDN1-204ENST00000512707 E2F8A0AVK6 867 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 F5H5T6 163 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 EEF2KO00418 725 aaKnown RBP11.23□□□□□ -0.61
PFDN1-204ENST00000512707 SLC9A3R1O14745 358 aaPredicted RBP11.23□□□□□ -0.61
PFDN1-204ENST00000512707 FGF10O15520 208 aaPredicted RBP11.23□□□□□ -0.61
PFDN1-204ENST00000512707 CREB3O43889 395 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 STC2O76061 302 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 PYGMP11217 842 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 L1CAMP32004 1257 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 PTPN7P35236 360 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 TIE1P35590 1138 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 AMPD2Q01433 879 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 ZNF211Q13398 564 aaPredicted RBP11.23□□□□□ -0.61
PFDN1-204ENST00000512707 LONRF2Q1L5Z9 754 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 ATP13A4Q4VNC1 1196 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 RABGAP1LQ5R372 815 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 STXBP5Q5T5C0 1151 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 TXNRD3NBQ6F5E7 133 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 CYP4V2Q6ZWL3 525 aaPredicted RBP11.23□□□□□ -0.61
PFDN1-204ENST00000512707 CHSY1Q86X52 802 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 RFX6Q8HWS3 928 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 DENND1CQ8IV53 801 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 CELF5Q8N6W0 485 aaKnown RBP11.23□□□□□ -0.61
PFDN1-204ENST00000512707 ITFG1Q8TB96 612 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 ZSCAN18Q8TBC5 510 aaPredicted RBP11.23□□□□□ -0.61
PFDN1-204ENST00000512707 SH3RF2Q8TEC5 729 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 RAPGEF5Q92565 580 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 E2F7Q96AV8 911 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 TBC1D31Q96DN5 1066 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 CAPZA3Q96KX2 299 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 SLC22A12Q96S37 553 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 OSBPL8Q9BZF1 889 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 PCDH18Q9HCL0 1135 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 GKN1Q9NS71 199 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 CDH7Q9ULB5 785 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 MYO7AQ13402 2215 aa11.23□□□□□ -0.61
PFDN1-204ENST00000512707 LEFTY2O00292 366 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 ACSL4O60488 711 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 SRGAP2O75044 1071 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 MOSPD3O75425 235 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 FGGP02679 453 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 EPHB2P29323 1055 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 GBP2P32456 591 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-204ENST00000512707 CHKAP35790 457 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 CDKN2BP42772 138 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 HCAR3P49019 387 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 KCNQ1P51787 676 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 MLLT6P55198 1093 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-204ENST00000512707 NRG1Q02297 640 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-204ENST00000512707 DPYSL3Q14195 570 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 CBX2Q14781 532 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-204ENST00000512707 CCDC85BQ15834 202 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-204ENST00000512707 ADGRF1Q5T601 910 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 TTC39BQ5VTQ0 682 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-204ENST00000512707 DCAF12L1Q5VU92 463 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 KAZNQ674X7 775 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 RWDD4Q6NW29 188 aaKnown RBP11.22□□□□□ -0.61
PFDN1-204ENST00000512707 MFSD7Q6UXD7 560 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 RFX8Q6ZV50 586 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 OTOP3Q7RTS5 596 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 CCDC117Q8IWD4 279 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-204ENST00000512707 NPAS3Q8IXF0 933 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 KIAA1958Q8N8K9 716 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 TTC13Q8NBP0 860 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms