RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 TMEM62Q0P6H9 643 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 BST2Q10589 180 aaKnown RBP9.85□□□□□ -0.83
MSH3-203ENST00000512531 SKIDA1Q1XH10 827 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 GOLGA7BQ2TAP0 167 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 P3H1Q32P28 736 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 EFHC1Q5JVL4 640 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 GKAP1Q5VSY0 366 aaPredicted RBP9.85□□□□□ -0.83
MSH3-203ENST00000512531 ARHGAP17Q68EM7 881 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 SYCE2Q6PIF2 218 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 MFSD7Q6UXD7 560 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 ARHGEF18Q6ZSZ5 1173 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 BBS12Q6ZW61 710 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 CPLX4Q7Z7G2 160 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 NLRP14Q86W24 1093 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 CDR2LQ86X02 465 aaPredicted RBP9.85□□□□□ -0.83
MSH3-203ENST00000512531 PPIL6Q8IXY8 311 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 SH2D3CQ8N5H7 860 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 TOP6BLQ8N6T0 577 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 VN1R2Q8NFZ6 395 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 TMEM40Q8WWA1 233 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 TFAP2BQ92481 460 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 CASP10Q92851 521 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 ELMO3Q96BJ8 720 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 ALKBH8Q96BT7 664 aaKnown RBP9.85□□□□□ -0.83
MSH3-203ENST00000512531 TLCD1Q96CP7 247 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 ZBTB10Q96DT7 871 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 HSFY1Q96LI6 401 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 RIPOR3Q96MK2 946 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 TRIM62Q9BVG3 475 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 ELOVL4Q9GZR5 314 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 ADAMTS10Q9H324 1103 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 CDC42EP4Q9H3Q1 356 aaKnown RBP9.85□□□□□ -0.83
MSH3-203ENST00000512531 ZWILCHQ9H900 591 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 UBN1Q9NPG3 1134 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 CHST12Q9NRB3 414 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 INTS9Q9NV88 658 aaKnown RBP9.85□□□□□ -0.83
MSH3-203ENST00000512531 SNTG2Q9NY99 539 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 NKIRAS1Q9NYS0 192 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 ACTL7BQ9Y614 415 aa9.85□□□□□ -0.83
MSH3-203ENST00000512531 GOLGA6L7A0A1B0GV03 622 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 TCRBV7S2A1N4TA0A589 114 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 F8VP50 259 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 PER2O15055 1255 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 CST8O60676 142 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 GPR32O75388 356 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 LRCH4O75427 683 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 RECQL4O94761 1208 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 STK10O94804 968 aaKnown RBP9.84□□□□□ -0.83
MSH3-203ENST00000512531 TRUB2O95900 331 aaKnown RBP9.84□□□□□ -0.83
MSH3-203ENST00000512531 EOMESO95936 686 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 CALCAP01258 141 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 FGFR4P22455 802 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 GNL1P36915 607 aaPredicted RBP9.84□□□□□ -0.83
MSH3-203ENST00000512531 GATMP50440 423 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 RAB27AP51159 221 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 CDH8P55286 799 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 SARNPP82979 210 aaKnown RBP9.84□□□□□ -0.83
MSH3-203ENST00000512531 DAB2P98082 770 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 SLC6A3Q01959 620 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 ROR1Q01973 937 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 GPS1Q13098 491 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 KLHL38Q2WGJ6 581 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 C2CD6Q53TS8 623 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 C9orf57Q5W0N0 161 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 TWF2Q6IBS0 349 aaKnown RBP9.84□□□□□ -0.83
MSH3-203ENST00000512531 HIBCHQ6NVY1 386 aaPredicted RBP9.84□□□□□ -0.83
MSH3-203ENST00000512531 KCNT2Q6UVM3 1135 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 PDZD4Q76G19 769 aaPredicted RBP9.84□□□□□ -0.83
MSH3-203ENST00000512531 FAM228AQ86W67 206 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 CDKL3Q8IVW4 592 aaPredicted RBP9.84□□□□□ -0.83
MSH3-203ENST00000512531 PDIK1LQ8N165 341 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 LRRC43Q8N309 656 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 WDTC1Q8N5D0 677 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 SPATA18Q8TC71 538 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 ATG4AQ8WYN0 398 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 ZNF558Q96NG5 402 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 CPXM1Q96SM3 734 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 RBM15Q96T37 977 aaKnown RBP eCLIP9.84□□□□□ -0.83
MSH3-203ENST00000512531 OSMRQ99650 979 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 CALN1Q9BXU9 219 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 TRIM7Q9C029 511 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 SEMA4AQ9H3S1 761 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 GDAP2Q9NXN4 497 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 SAMD15Q9P1V8 674 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 STAP1Q9ULZ2 295 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 NEU2Q9Y3R4 380 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 IKBKGQ9Y6K9 419 aa9.84□□□□□ -0.83
MSH3-203ENST00000512531 RIF1Q5UIP0 2472 aaKnown RBP9.83□□□□□ -0.84
MSH3-203ENST00000512531 ZFHX2Q9C0A1 2572 aaPredicted RBP9.83□□□□□ -0.84
MSH3-203ENST00000512531 KPNA7A9QM74 516 aa9.83□□□□□ -0.84
MSH3-203ENST00000512531 APOL1O14791 398 aa9.83□□□□□ -0.84
MSH3-203ENST00000512531 SCAMP3O14828 347 aaKnown RBP9.83□□□□□ -0.84
MSH3-203ENST00000512531 GFRA3O60609 400 aa9.83□□□□□ -0.84
MSH3-203ENST00000512531 ACSL3O95573 720 aa9.83□□□□□ -0.84
MSH3-203ENST00000512531 IFNB1P01574 187 aa9.83□□□□□ -0.84
MSH3-203ENST00000512531 KLRC2P26717 231 aa9.83□□□□□ -0.84
MSH3-203ENST00000512531 MIPP30301 263 aa9.83□□□□□ -0.84
MSH3-203ENST00000512531 FLT3P36888 993 aa9.83□□□□□ -0.84
MSH3-203ENST00000512531 MTHFRP42898 656 aa9.83□□□□□ -0.84
MSH3-203ENST00000512531 MAGEA4P43358 317 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms