RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 NFE2Q16621 373 aaPredicted RBP13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 CA9Q16790 459 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 EFHC2Q5JST6 749 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 OTUD1Q5VV17 481 aaPredicted RBP13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 LEKR1Q6ZMV7 388 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 UNC45BQ8IWX7 931 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 RIBC1Q8N443 379 aaPredicted RBP13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 NAT8LQ8N9F0 302 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 GLIS1Q8NBF1 620 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 FUBP3Q96I24 572 aaKnown RBP eCLIP13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 CSPG4P5Q96PW8 444 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 KCTD15Q96SI1 283 aaPredicted RBP13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 OXCT2Q9BYC2 517 aaPredicted RBP13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 USP29Q9HBJ7 922 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 TBC1D13Q9NVG8 400 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 GPATCH2LQ9NWQ4 482 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 SAE1Q9UBE0 346 aaPredicted RBP13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 A0A087WUV0 522 aaPredicted RBP13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 E7ESA3 106 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 ENPP3O14638 875 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 NRP1O14786 923 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 CHADO15335 359 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 SHBGP04278 402 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 FYNP06241 537 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 ETS1P14921 441 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 NDUFV1P49821 464 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 PPP2R2AP63151 447 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 ZXDAP98168 799 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 RASA2Q15283 850 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 HIF1AQ16665 826 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 ARL13BQ3SXY8 428 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 SLC45A4Q5BKX6 768 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 PPP6R3Q5H9R7 873 aaPredicted RBP13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 KCTD16Q68DU8 428 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 C1orf228Q6PIY5 440 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 PDZD4Q76G19 769 aaPredicted RBP13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 SPATA2LQ8IUW3 424 aaPredicted RBP13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 SH2D3CQ8N5H7 860 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 CCDC185Q8N715 623 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 FAM71DQ8N9W8 422 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 CPT1BQ92523 772 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 QKIQ96PU8 341 aaKnown RBP eCLIP13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 FERMT1Q9BQL6 677 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 MRPL9Q9BYD2 267 aaKnown RBP13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 ADAM33Q9BZ11 813 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 ZCWPW1Q9H0M4 648 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 CENPHQ9H3R5 247 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 HIPK3Q9H422 1215 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 FETUBQ9UGM5 382 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 LGALS13Q9UHV8 139 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 NOVA2Q9UNW9 492 aaKnown RBP13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 PCDHB7Q9Y5E2 793 aa13.57□□□□□ -0.24
DEPDC1B-206ENST00000512452 PATJQ8NI35 1801 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 OR6C75A6NL08 312 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 YJEFN3A6XGL0 299 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 E7ENQ6 273 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 I3L4J1 428 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 NBNO60934 754 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 GCATO75600 419 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 DDHD2O94830 711 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 BDNFP23560 247 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 HTR7P34969 479 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 ADRA1BP35368 520 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 MAGEA11P43364 429 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 GDF10P55107 478 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 RNASELQ05823 741 aaKnown RBP13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 SMARCB1Q12824 385 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 ELAVL2Q12926 359 aaKnown RBP13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 PAFAH1B3Q15102 231 aaKnown RBP13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 KYNUQ16719 465 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 VSTM1Q6UX27 236 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 TAOK1Q7L7X3 1001 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 BHLHA9Q7RTU4 235 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 FAM131BQ86XD5 332 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 ZNF280BQ86YH2 543 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 TDRPQ86YL5 185 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 ABI1Q8IZP0 508 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 OR10T2Q8NGX3 314 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 RNF139Q8WU17 664 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 KCNK16Q96T55 309 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 TMEM175Q9BSA9 504 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 COLEC11Q9BWP8 271 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 BRD8Q9H0E9 1235 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 SAYSD1Q9NPB0 183 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 CWC15Q9P013 229 aaKnown RBP13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 FBXW11Q9UKB1 542 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 GPR179Q6PRD1 2367 aa13.56□□□□□ -0.24
DEPDC1B-206ENST00000512452 MYO15AQ9UKN7 3530 aa13.55□□□□□ -0.24
DEPDC1B-206ENST00000512452 C5orf60A6NFR6 353 aa13.55□□□□□ -0.24
DEPDC1B-206ENST00000512452 E7EVH7 732 aa13.55□□□□□ -0.24
DEPDC1B-206ENST00000512452 CDH16O75309 829 aa13.55□□□□□ -0.24
DEPDC1B-206ENST00000512452 ACSL3O95573 720 aa13.55□□□□□ -0.24
DEPDC1B-206ENST00000512452 CXCL10P02778 98 aa13.55□□□□□ -0.24
DEPDC1B-206ENST00000512452 ITGB1P05556 798 aa13.55□□□□□ -0.24
DEPDC1B-206ENST00000512452 USP17L7P0C7H9 530 aa13.55□□□□□ -0.24
DEPDC1B-206ENST00000512452 MDH1P40925 334 aaKnown RBP13.55□□□□□ -0.24
DEPDC1B-206ENST00000512452 CXCR3P49682 368 aa13.55□□□□□ -0.24
DEPDC1B-206ENST00000512452 IRAK1P51617 712 aa13.55□□□□□ -0.24
DEPDC1B-206ENST00000512452 ATXN1P54253 815 aaKnown RBP13.55□□□□□ -0.24
DEPDC1B-206ENST00000512452 CACNA2D1P54289 1103 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms