RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 STC2O76061 302 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 FAM13AO94988 1023 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 HSP90AA1P07900 732 aaKnown RBP9.58□□□□□ -0.88
NUP54-211ENST00000512151 GIMD1P0DJR0 217 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 DAB2P98082 770 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 KCNA1Q09470 495 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 ZNF211Q13398 564 aaPredicted RBP9.58□□□□□ -0.88
NUP54-211ENST00000512151 TRIM29Q14134 588 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 CLCA4Q14CN2 919 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 ISXQ2M1V0 245 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 FNDC3BQ53EP0 1204 aaKnown RBP9.58□□□□□ -0.88
NUP54-211ENST00000512151 XKR5Q6UX68 686 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 TMC6Q7Z403 805 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 FAM35AQ86V20 835 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 GPBP1Q86WP2 473 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 PTRH1Q86Y79 214 aaKnown RBP9.58□□□□□ -0.88
NUP54-211ENST00000512151 FAM26EQ8N5C1 309 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 ZMIZ2Q8NF64 920 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 CACTINQ8WUQ7 758 aaKnown RBP9.58□□□□□ -0.88
NUP54-211ENST00000512151 ATXN7L3BQ96GX2 97 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 ARHGAP9Q9BRR9 750 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 PABPC3Q9H361 631 aaKnown RBP9.58□□□□□ -0.88
NUP54-211ENST00000512151 ERVMER34-1Q9H9K5 563 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 PARVGQ9HBI0 331 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 UCKL1Q9NWZ5 548 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 RBAKQ9NYW8 714 aaPredicted RBP9.58□□□□□ -0.88
NUP54-211ENST00000512151 LSM7Q9UK45 103 aaKnown RBP9.58□□□□□ -0.88
NUP54-211ENST00000512151 ATXN7L1Q9ULK2 861 aaPredicted RBP9.58□□□□□ -0.88
NUP54-211ENST00000512151 MTMR6Q9Y217 621 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 ZDHHC9Q9Y397 364 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 ITPR3Q14573 2671 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 DOCK9Q9BZ29 2069 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 ZFC3H1O60293 1989 aaKnown RBP9.57□□□□□ -0.88
NUP54-211ENST00000512151 CASC3O15234 703 aaKnown RBP9.57□□□□□ -0.88
NUP54-211ENST00000512151 LZTS3O60299 673 aaPredicted RBP9.57□□□□□ -0.88
NUP54-211ENST00000512151 NOBOXO60393 691 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 BEST1O76090 585 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 DNTTP04053 509 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 ITGB2P05107 769 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 SCP2P22307 547 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 RBMS1P29558 406 aaKnown RBP9.57□□□□□ -0.88
NUP54-211ENST00000512151 RIPPLY3P57055 190 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 ASIC1P78348 528 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 ZBTB16Q05516 673 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 DHX8Q14562 1220 aaKnown RBP9.57□□□□□ -0.88
NUP54-211ENST00000512151 EIF4HQ15056 248 aaKnown RBP9.57□□□□□ -0.88
NUP54-211ENST00000512151 TBR1Q16650 682 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 USP53Q70EK8 1073 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 OR6B3Q8NGW1 331 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 SKA1Q96BD8 255 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 SGF29Q96ES7 293 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 SERAC1Q96JX3 654 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 RAB34Q9BZG1 259 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 NEUROG2Q9H2A3 272 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 SNX25Q9H3E2 840 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 ZHX3Q9H4I2 956 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 NMUR1Q9HB89 426 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 CYLDQ9NQC7 956 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.57□□□□□ -0.88
NUP54-211ENST00000512151 TJP2Q9UDY2 1190 aa9.57□□□□□ -0.88
NUP54-211ENST00000512151 TDRD6O60522 2096 aaKnown RBP9.56□□□□□ -0.88
NUP54-211ENST00000512151 FFAR2O15552 330 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 CYP26A1O43174 497 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 STX6O43752 255 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 TMEM191BP0C7N4 346 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 CKMT1AP12532 417 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 ATP5C1P36542 298 aaKnown RBP9.56□□□□□ -0.88
NUP54-211ENST00000512151 DUSP3P51452 185 aaPredicted RBP9.56□□□□□ -0.88
NUP54-211ENST00000512151 PPP2CBP62714 309 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 PPP2CAP67775 309 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 EHHADHQ08426 723 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 TGIF1Q15583 401 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 TTC31Q49AM3 519 aaPredicted RBP9.56□□□□□ -0.88
NUP54-211ENST00000512151 SGO2Q562F6 1265 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 ZNF776Q68DI1 518 aaPredicted RBP9.56□□□□□ -0.88
NUP54-211ENST00000512151 GPRIN1Q7Z2K8 1008 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 CLEC14AQ86T13 490 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 B3GALNT2Q8NCR0 500 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 OR4C6Q8NH72 309 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 GANCQ8TET4 914 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 CCDC97Q96F63 343 aaPredicted RBP9.56□□□□□ -0.88
NUP54-211ENST00000512151 LIN37Q96GY3 246 aaPredicted RBP9.56□□□□□ -0.88
NUP54-211ENST00000512151 SMOQ99835 787 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 STRA6Q9BX79 667 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 FOXP1Q9H334 677 aaPredicted RBP9.56□□□□□ -0.88
NUP54-211ENST00000512151 ST6GALNAC4Q9H4F1 302 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 LRRC4CQ9HCJ2 640 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 BLOC1S4Q9NUP1 217 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 INTS13Q9NVM9 706 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 FBXL12Q9NXK8 326 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 PLEKHB1Q9UF11 243 aaPredicted RBP9.56□□□□□ -0.88
NUP54-211ENST00000512151 ENTPD2Q9Y5L3 495 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 POLQO75417 2590 aa9.56□□□□□ -0.88
NUP54-211ENST00000512151 A0A1W2PP55 124 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 VPS37CA5D8V6 355 aaPredicted RBP9.55□□□□□ -0.88
NUP54-211ENST00000512151 MID1O15344 667 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 TIMM44O43615 452 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 PPFIA2O75334 1257 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 TACC1O75410 805 aa9.55□□□□□ -0.88
NUP54-211ENST00000512151 PPP1R37O75864 691 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms