RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 LMLNQ96KR4 655 aa16.75■□□□□ 0.27
PDLIM5-216ENST00000511767 NPY6RQ99463 290 aa16.75■□□□□ 0.27
PDLIM5-216ENST00000511767 GABRG3Q99928 467 aa16.75■□□□□ 0.27
PDLIM5-216ENST00000511767 DDX50Q9BQ39 737 aaKnown RBP16.75■□□□□ 0.27
PDLIM5-216ENST00000511767 CBX8Q9HC52 389 aa16.75■□□□□ 0.27
PDLIM5-216ENST00000511767 POLMQ9NP87 494 aaPredicted RBP16.75■□□□□ 0.27
PDLIM5-216ENST00000511767 THAP10Q9P2Z0 257 aaPredicted RBP16.75■□□□□ 0.27
PDLIM5-216ENST00000511767 FRYLO94915 3013 aa16.75■□□□□ 0.27
PDLIM5-216ENST00000511767 GON4LQ3T8J9 2241 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 DCLK1O15075 740 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 TBL1XO60907 577 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 UNGP13051 313 aaPredicted RBP16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 GBP1P32455 592 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 SCNN1AP37088 669 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 MATKP42679 507 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 RNASE9P60153 205 aaKnown RBP16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 ENPP2Q13822 863 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 SKOR2Q2VWA4 1001 aaPredicted RBP16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 C2CD6Q53TS8 623 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 NAA35Q5VZE5 725 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 LAIR1Q6GTX8 287 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 SDE2Q6IQ49 451 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 ANO7Q6IWH7 933 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 CEP68Q76N32 757 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 CACNA2D4Q7Z3S7 1137 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 IRF2BP2Q7Z5L9 587 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 KBTBD6Q86V97 674 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 CHPFQ8IZ52 775 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 FAM160A2Q8N612 972 aaPredicted RBP16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 MDGA1Q8NFP4 955 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 FIBINQ8TAL6 211 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 IPO4Q8TEX9 1081 aaKnown RBP16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 BTN2A3PQ96KV6 586 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 PRMT1Q99873 361 aaKnown RBP16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 ADAM33Q9BZ11 813 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 NUCKS1Q9H1E3 243 aaKnown RBP16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 CALCOCO1Q9P1Z2 691 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 TMEM59LQ9UK28 342 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 RAB23Q9ULC3 237 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 INVSQ9Y283 1065 aa16.74■□□□□ 0.27
PDLIM5-216ENST00000511767 A0A1B0GTH6 734 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 FAM170AA1A519 330 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 ALDH1A2O94788 518 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 RETP07949 1114 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 SLC2A3P11169 496 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 MMP8P22894 467 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 RPS24P62847 133 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 PLK5Q496M5 336 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 FILIP1LQ4L180 1135 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 USP39Q53GS9 565 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 KIAA1211LQ6NV74 962 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 ADIPOR2Q86V24 386 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 DDIT4Q9NX09 232 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 CACNA2D2Q9NY47 1150 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 STIM2Q9P246 746 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 NCDNQ9UBB6 729 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 SLC12A6Q9UHW9 1150 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 STON1Q9Y6Q2 735 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 CFAP54Q96N23 3096 aa16.73■□□□□ 0.27
PDLIM5-216ENST00000511767 SPTBN4Q9H254 2564 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 M0QYT0 321 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 NPC1O15118 1278 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 DAB1O75553 588 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 MOCS2O96007 188 aaPredicted RBP16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 APOEP02649 317 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 TFE3P19532 575 aaPredicted RBP16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 TACR2P21452 398 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 CCR1P32246 355 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 CXCR3P49682 368 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 ARID5AQ03989 594 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 EIF4HQ15056 248 aaKnown RBP16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 OTUD1Q5VV17 481 aaPredicted RBP16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 TRIM72Q6ZMU5 477 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 ARCQ7LC44 396 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 ANKS1BQ7Z6G8 1248 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 CFAP52Q8N1V2 620 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 ATP6V0D2Q8N8Y2 350 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 SLC30A5Q8TAD4 765 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 WFDC5Q8TCV5 224 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 UCMAQ8WVF2 138 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 SORCS1Q8WY21 1168 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 BAP1Q92560 729 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 LOXL4Q96JB6 756 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 AGPAT1Q99943 283 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 DUSP15Q9H1R2 295 aaPredicted RBP16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 FAM204AQ9H8W3 233 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 RRN3Q9NYV6 651 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 KIAA1549LQ6ZVL6 1849 aa16.72■□□□□ 0.27
PDLIM5-216ENST00000511767 SYNJ2BP-COX16A0A087WUM0 186 aa16.71■□□□□ 0.27
PDLIM5-216ENST00000511767 A0A1W2PQC6 194 aa16.71■□□□□ 0.27
PDLIM5-216ENST00000511767 TCRBV21S2A2A0A5A6 115 aa16.71■□□□□ 0.27
PDLIM5-216ENST00000511767 CAVIN2O95810 425 aa16.71■□□□□ 0.27
PDLIM5-216ENST00000511767 HOXB2P14652 356 aa16.71■□□□□ 0.27
PDLIM5-216ENST00000511767 GABRG2P18507 467 aa16.71■□□□□ 0.27
PDLIM5-216ENST00000511767 CD70P32970 193 aa16.71■□□□□ 0.27
PDLIM5-216ENST00000511767 IL12RB1P42701 662 aa16.71■□□□□ 0.27
PDLIM5-216ENST00000511767 PTP4A2Q12974 167 aa16.71■□□□□ 0.27
PDLIM5-216ENST00000511767 NME3Q13232 169 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms