RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SPPL3Q8TCT6 385 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 ADAMTS18Q8TE60 1221 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 UBXN10Q96LJ8 280 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 BBC3Q96PG8 261 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 FYTTD1Q96QD9 318 aaKnown RBP3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 TIMP4Q99727 224 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 CDCP1Q9H5V8 836 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 PRDM16Q9HAZ2 1276 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 RXFP3Q9NSD7 469 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 SAGE1Q9NXZ1 904 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 ASIC5Q9NY37 505 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 ADAM21Q9UKJ8 722 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 RRP7AQ9Y3A4 280 aaKnown RBP3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 PCDHA10Q9Y5I2 948 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 MBPP02686 304 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 ALDOAP04075 364 aaKnown RBP3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 PAX3P23760 479 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 PCP4P48539 62 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 AGTR2P50052 363 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 RCAN1P53805 252 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 TAS2R50P59544 299 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 SLC12A1Q13621 1099 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 AWAT1Q58HT5 328 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 STRIP1Q5VSL9 837 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 KYAT3Q6YP21 454 aaKnown RBP3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 ZNF575Q86XF7 245 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 PNLDC1Q8NA58 520 aaKnown RBP3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 SRFBP1Q8NEF9 429 aaKnown RBP3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 GLMPQ8WWB7 406 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 SARAFQ96BY9 339 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 SDCCAG3Q96C92 435 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 TRMT61AQ96FX7 289 aaKnown RBP3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 AGAP2Q99490 1192 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 RIOX1Q9H6W3 641 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 WDR26Q9H7D7 661 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 KCNK9Q9NPC2 374 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 RIC8AQ9NPQ8 531 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 ARL8BQ9NVJ2 186 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 ASNSD1Q9NWL6 643 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 C9orf78Q9NZ63 289 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 DERAQ9Y315 318 aa3.84□□□□□ -1.79
TRAPPC11-207ENST00000511409 C3orf70A6NLC5 250 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 BTBD19C9JJ37 291 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 POC1B-GALNT4F8VUJ3 575 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 H7C1Q1 480 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 SEPT4O43236 478 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 NUDT3O95989 172 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 TK1P04183 234 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 PYGLP06737 847 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 CYP2D6P10635 497 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 WT1P19544 449 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 CDK7P50613 346 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 TLE3Q04726 772 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 SLC14A1Q13336 389 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 GAB1Q13480 694 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 KPNB1Q14974 876 aaKnown RBP3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 LARS2Q15031 903 aaKnown RBP3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 SMAD1Q15797 465 aaKnown RBP3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 PFKFB3Q16875 520 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 LRRC24Q50LG9 513 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 ALFQ53S48 1182 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 ZNF362Q5T0B9 420 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 PRAMEF17Q5VTA0 474 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 CYP26C1Q6V0L0 522 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 RANBP10Q6VN20 620 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 HERC6Q8IVU3 1022 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 GALNT4Q8N4A0 578 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 LINC01465Q8N7H1 131 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 FSIP1Q8NA03 581 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 CLEC4CQ8WTT0 213 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 USP13Q92995 863 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 REPS1Q96D71 796 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 HIC2Q96JB3 615 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 PIGSQ96S52 555 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 RNF26Q9BY78 433 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 TRIM2Q9C040 744 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 NUAK2Q9H093 628 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 NOD2Q9HC29 1040 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 PDE11AQ9HCR9 933 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 ALG13Q9NP73 1137 aaKnown RBP3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 G6PC2Q9NQR9 355 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 SEMA4GQ9NTN9 838 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 SERGEFQ9UGK8 458 aa3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 LRRFIP2Q9Y608 721 aaKnown RBP3.83□□□□□ -1.8
TRAPPC11-207ENST00000511409 TCRBV5S1A1TA0A578 114 aa3.82□□□□□ -1.8
TRAPPC11-207ENST00000511409 MBD3L5A6NJ08 208 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC11-207ENST00000511409 TMEM232C9JQI7 657 aa3.82□□□□□ -1.8
TRAPPC11-207ENST00000511409 H3BNC9 293 aa3.82□□□□□ -1.8
TRAPPC11-207ENST00000511409 STX16-NPEPL1H3BU86 382 aa3.82□□□□□ -1.8
TRAPPC11-207ENST00000511409 STX16O14662 325 aa3.82□□□□□ -1.8
TRAPPC11-207ENST00000511409 NCAM2O15394 837 aa3.82□□□□□ -1.8
TRAPPC11-207ENST00000511409 HNRNPRO43390 633 aaKnown RBP3.82□□□□□ -1.8
TRAPPC11-207ENST00000511409 RNF8O76064 485 aa3.82□□□□□ -1.8
TRAPPC11-207ENST00000511409 HEXIM1O94992 359 aaKnown RBP3.82□□□□□ -1.8
TRAPPC11-207ENST00000511409 AGR2O95994 175 aa3.82□□□□□ -1.8
TRAPPC11-207ENST00000511409 IGLV2-14P01704 120 aa3.82□□□□□ -1.8
TRAPPC11-207ENST00000511409 TFRCP02786 760 aaKnown RBP3.82□□□□□ -1.8
TRAPPC11-207ENST00000511409 POLBP06746 335 aa3.82□□□□□ -1.8
TRAPPC11-207ENST00000511409 CKMT1AP12532 417 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms