RNA–Protein interactions for RNA: ENST00000511129.2

SCARB2-205, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-205ENST00000511129 CFAP36Q96G28 342 aa5.4□□□□□ -1.54
SCARB2-205ENST00000511129 LRFN3Q9BTN0 628 aa5.4□□□□□ -1.54
SCARB2-205ENST00000511129 BHMT2Q9H2M3 363 aa5.4□□□□□ -1.54
SCARB2-205ENST00000511129 MRPL46Q9H2W6 279 aaKnown RBP5.4□□□□□ -1.54
SCARB2-205ENST00000511129 GHITMQ9H3K2 345 aa5.4□□□□□ -1.54
SCARB2-205ENST00000511129 TRPM5Q9NZQ8 1165 aa5.4□□□□□ -1.54
SCARB2-205ENST00000511129 EXTL2Q9UBQ6 330 aa5.4□□□□□ -1.54
SCARB2-205ENST00000511129 AASSQ9UDR5 926 aa5.4□□□□□ -1.54
SCARB2-205ENST00000511129 TBC1D29Q9UFV1 150 aa5.4□□□□□ -1.54
SCARB2-205ENST00000511129 CPA4Q9UI42 421 aa5.4□□□□□ -1.54
SCARB2-205ENST00000511129 L1RE1Q9UN81 338 aa5.4□□□□□ -1.54
SCARB2-205ENST00000511129 TSC22D4Q9Y3Q8 395 aa5.4□□□□□ -1.54
SCARB2-205ENST00000511129 AATKQ6ZMQ8 1374 aa5.4□□□□□ -1.55
SCARB2-205ENST00000511129 NINLQ9Y2I6 1382 aa5.4□□□□□ -1.55
SCARB2-205ENST00000511129 CRB1P82279 1406 aa5.4□□□□□ -1.55
SCARB2-205ENST00000511129 TNS2Q63HR2 1409 aa5.4□□□□□ -1.55
SCARB2-205ENST00000511129 TAF1LQ8IZX4 1826 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 RHPN2P1A8MT19 583 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 TISP43B9A030 160 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 B9A039 149 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 LEFTY2O00292 366 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 CAPN9O14815 690 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 TRIM24O15164 1050 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 AGFG2O95081 481 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 GNAI2P04899 355 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 GJB1P08034 283 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 ADRB1P08588 477 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 SLC6A2P23975 617 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 PDIA3P30101 505 aaKnown RBP5.39□□□□□ -1.55
SCARB2-205ENST00000511129 KCNJ5P48544 419 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 RNASE9P60153 205 aaKnown RBP5.39□□□□□ -1.55
SCARB2-205ENST00000511129 VAMP2P63027 116 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 NOMO3P69849 1222 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 TFCP2Q12800 502 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 SEMA3AQ14563 771 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 RABEP1Q15276 862 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 CNN3Q15417 329 aaKnown RBP5.39□□□□□ -1.55
SCARB2-205ENST00000511129 OASLQ15646 514 aaKnown RBP5.39□□□□□ -1.55
SCARB2-205ENST00000511129 MMEL1Q495T6 779 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 FBXO47Q5MNV8 452 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 LRCH2Q5VUJ6 765 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 KAZNQ674X7 775 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 GPR139Q6DWJ6 353 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 ALKBH5Q6P6C2 394 aaKnown RBP5.39□□□□□ -1.55
SCARB2-205ENST00000511129 CTR9Q6PD62 1173 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 FOXR2Q6PJQ5 311 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 ZNF365Q70YC5 407 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 NUP54Q7Z3B4 507 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 PRPF39Q86UA1 669 aaKnown RBP5.39□□□□□ -1.55
SCARB2-205ENST00000511129 FAM90A1Q86YD7 464 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 SYT12Q8IV01 421 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 OR52K2Q8NGK3 314 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 CPT1CQ8TCG5 803 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 OTUD7AQ8TE49 926 aaPredicted RBP5.39□□□□□ -1.55
SCARB2-205ENST00000511129 BRI3BPQ8WY22 251 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 HERVK_113Q902F9 699 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 NEK1Q96PY6 1258 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 CCDC94Q9BW85 323 aaPredicted RBP5.39□□□□□ -1.55
SCARB2-205ENST00000511129 C1orf43Q9BWL3 253 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 C1QTNF3Q9BXJ4 246 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 NT5C3AQ9H0P0 336 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 TCF7L2Q9NQB0 619 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 RLIMQ9NVW2 624 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 CHORDC1Q9UHD1 332 aaPredicted RBP5.39□□□□□ -1.55
SCARB2-205ENST00000511129 VPS28Q9UK41 221 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 ZDHHC8Q9ULC8 765 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 PCDHA6Q9UN73 950 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 USP15Q9Y4E8 981 aaPredicted RBP5.39□□□□□ -1.55
SCARB2-205ENST00000511129 FLT1P17948 1338 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 SPATA31A1Q5TZJ5 1347 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 TTC21AQ8NDW8 1320 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 COL24A1Q17RW2 1714 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 QSER1Q2KHR3 1735 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 SMG6Q86US8 1419 aaKnown RBP5.39□□□□□ -1.55
SCARB2-205ENST00000511129 NSD3Q9BZ95 1437 aa5.39□□□□□ -1.55
SCARB2-205ENST00000511129 MEGF6O75095 1541 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 A8MVJ9 347 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 AKR1B15C9JRZ8 316 aaPredicted RBP5.38□□□□□ -1.55
SCARB2-205ENST00000511129 PHGDHO43175 533 aaKnown RBP5.38□□□□□ -1.55
SCARB2-205ENST00000511129 ZBTB14O43829 449 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 KLHL41O60662 606 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 SRGAP2O75044 1071 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 SOCS5O75159 536 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 SOAT2O75908 522 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 TGDSO95455 350 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 GCP02774 474 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 GZMAP12544 262 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 ATP1A3P13637 1013 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 CD9P21926 228 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 MSH2P43246 934 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 MXI1P50539 228 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 NLRP5P59047 1200 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 MXRA7P84157 204 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 IL1RL1Q01638 556 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 R3HDM1Q15032 1099 aaKnown RBP5.38□□□□□ -1.55
SCARB2-205ENST00000511129 POLD3Q15054 466 aaPredicted RBP5.38□□□□□ -1.55
SCARB2-205ENST00000511129 POSTNQ15063 836 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 ANKDD1AQ495B1 522 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 RABL3Q5HYI8 236 aa5.38□□□□□ -1.55
SCARB2-205ENST00000511129 SPDYAQ5MJ70 313 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms