RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	MAPK15	Q8TD08	544 aa		11.3	□□□□□ -0.6
PTCD2-208	ENST00000510676	CIPC	Q9C0C6	399 aa		11.3	□□□□□ -0.6
PTCD2-208	ENST00000510676	RSPH9	Q9H1X1	276 aa	Predicted RBP	11.3	□□□□□ -0.6
PTCD2-208	ENST00000510676	PABPC3	Q9H361	631 aa	Known RBP	11.3	□□□□□ -0.6
PTCD2-208	ENST00000510676	KCND2	Q9NZV8	630 aa		11.3	□□□□□ -0.6
PTCD2-208	ENST00000510676	LARS	Q9P2J5	1176 aa	Known RBP	11.3	□□□□□ -0.6
PTCD2-208	ENST00000510676	ITGA11	Q9UKX5	1188 aa		11.3	□□□□□ -0.6
PTCD2-208	ENST00000510676	VPS37C	A5D8V6	355 aa	Predicted RBP	11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	FAM47DP	A6NHR8	397 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	MAGEC1	O60732	1142 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	PLCG1	P19174	1290 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	WARS	P23381	471 aa	Known RBP	11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	SLC5A2	P31639	672 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	PGF	P49763	221 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	GOLGA8F	Q08AF8	430 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	GOLGA8DP	Q0D2H9	430 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	HS1BP3	Q53T59	392 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	NAPEPLD	Q6IQ20	393 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	RBM44	Q6ZP01	1051 aa	Known RBP	11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	TMC6	Q7Z403	805 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	KCNK18	Q7Z418	384 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	IGSF22	Q8N9C0	903 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	ZSCAN1	Q8NBB4	408 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	SCAMP5	Q8TAC9	235 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	APOLD1	Q96LR9	279 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	SLC2A11	Q9BYW1	496 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	ZNF518B	Q9C0D4	1074 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	NACA2	Q9H009	215 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	OSBPL2	Q9H1P3	480 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	CYLD	Q9NQC7	956 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	UCKL1	Q9NWZ5	548 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	COMMD8	Q9NX08	183 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	FBXL12	Q9NXK8	326 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	SERGEF	Q9UGK8	458 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	SIX4	Q9UIU6	781 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	FZD4	Q9ULV1	537 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	NCKAP1	Q9Y2A7	1128 aa		11.29	□□□□□ -0.6
PTCD2-208	ENST00000510676	CCDC187	A0A096LP49	1063 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	ANKRD63	C9JTQ0	380 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	RIOK3	O14730	519 aa	Known RBP	11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	TBX18	O95935	607 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	RNF224	P0DH78	156 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	LIPC	P11150	499 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	WT1	P19544	449 aa	Predicted RBP	11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	PSMA5	P28066	241 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	PDX1	P52945	283 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	WNT7B	P56706	349 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	CYP4F2	P78329	520 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	TFAM	Q00059	246 aa	Known RBP	11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	RAD51AP2	Q09MP3	1159 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	IFRD2	Q12894	506 aa	Predicted RBP	11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	MDH1B	Q5I0G3	518 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	ADAL	Q6DHV7	355 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	BORA	Q6PGQ7	559 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	KLHDC10	Q6PID8	442 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	DIS3L2	Q8IYB7	885 aa	Known RBP	11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	TPCN2	Q8NHX9	752 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	IFI44	Q8TCB0	444 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	SNX29	Q8TEQ0	813 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	NLGN3	Q9NZ94	848 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	AGO2	Q9UKV8	859 aa	Known RBP	11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	CLEC4E	Q9ULY5	219 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	NME7	Q9Y5B8	376 aa		11.28	□□□□□ -0.6
PTCD2-208	ENST00000510676	ZFC3H1	O60293	1989 aa	Known RBP	11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	MYH11	P35749	1972 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	PDGFRB	P09619	1106 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	CHKA	P35790	457 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	SLC5A3	P53794	718 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	POLE2	P56282	527 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	RBP5	P82980	135 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	SFSWAP	Q12872	951 aa	Known RBP	11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	STK3	Q13188	491 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	FHL5	Q5TD97	284 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	SLFN12L	Q6IEE8	588 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	RUFY3	Q7L099	469 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	RSRC2	Q7L4I2	434 aa	Known RBP	11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	CSGALNACT2	Q8N6G5	542 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	ZNF366	Q8N895	744 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	C4orf32	Q8N8J7	132 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	WASF1	Q92558	559 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	EVA1B	Q9NVM1	165 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	ARHGAP20	Q9P2F6	1191 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	PLA2G4C	Q9UP65	541 aa		11.27	□□□□□ -0.61
PTCD2-208	ENST00000510676	WIPF3	A6NGB9	483 aa		11.26	□□□□□ -0.61
PTCD2-208	ENST00000510676	TISP43	B9A030	160 aa		11.26	□□□□□ -0.61
PTCD2-208	ENST00000510676	NVL	O15381	856 aa	Known RBP	11.26	□□□□□ -0.61
PTCD2-208	ENST00000510676	FFAR2	O15552	330 aa		11.26	□□□□□ -0.61
PTCD2-208	ENST00000510676	CTDNEP1	O95476	244 aa		11.26	□□□□□ -0.61
PTCD2-208	ENST00000510676	KLKB1	P03952	638 aa		11.26	□□□□□ -0.61
PTCD2-208	ENST00000510676	ALPPL2	P10696	532 aa		11.26	□□□□□ -0.61
PTCD2-208	ENST00000510676	FDPS	P14324	419 aa	Known RBP	11.26	□□□□□ -0.61
PTCD2-208	ENST00000510676	ATP5C1	P36542	298 aa	Known RBP	11.26	□□□□□ -0.61
PTCD2-208	ENST00000510676	NUDT1	P36639	197 aa		11.26	□□□□□ -0.61
PTCD2-208	ENST00000510676	ZNF131	P52739	623 aa		11.26	□□□□□ -0.61
PTCD2-208	ENST00000510676	GTF2B	Q00403	316 aa		11.26	□□□□□ -0.61
PTCD2-208	ENST00000510676	ARID5A	Q03989	594 aa		11.26	□□□□□ -0.61
PTCD2-208	ENST00000510676	FNDC3B	Q53EP0	1204 aa	Known RBP	11.26	□□□□□ -0.61
PTCD2-208	ENST00000510676	MANEA	Q5SRI9	462 aa		11.26	□□□□□ -0.61
PTCD2-208	ENST00000510676	C1QL3	Q5VWW1	255 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms