RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 GALNSP34059 522 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 CCT5P48643 541 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 RENBPP51606 427 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 PNLIPRP1P54315 467 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 TUBA4AP68366 448 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 GPC5P78333 572 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 RAE1P78406 368 aaKnown RBP4.39□□□□□ -1.71
CAST-229ENST00000510098 RNASELQ05823 741 aaKnown RBP4.39□□□□□ -1.71
CAST-229ENST00000510098 SF3A3Q12874 501 aaKnown RBP eCLIP4.39□□□□□ -1.71
CAST-229ENST00000510098 KCTD2Q14681 263 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 TAF5Q15542 800 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 TMEM63BQ5T3F8 832 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 ANKRD45Q5TZF3 282 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 TMEM65Q6PI78 240 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 RRAGAQ7L523 313 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 CPT1BQ92523 772 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 MCRS1Q96EZ8 462 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 PRR11Q96HE9 360 aaPredicted RBP4.39□□□□□ -1.71
CAST-229ENST00000510098 REXO5Q96IC2 774 aaKnown RBP4.39□□□□□ -1.71
CAST-229ENST00000510098 CCDC17Q96LX7 622 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 ADGRE3Q9BY15 652 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 SLC29A3Q9BZD2 475 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 TAF1DQ9H5J8 278 aaPredicted RBP4.39□□□□□ -1.71
CAST-229ENST00000510098 SEPSECSQ9HD40 501 aaKnown RBP4.39□□□□□ -1.71
CAST-229ENST00000510098 RXFP3Q9NSD7 469 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 DAPP1Q9UN19 280 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 C19orf53Q9UNZ5 99 aaPredicted RBP4.39□□□□□ -1.71
CAST-229ENST00000510098 CNTN6Q9UQ52 1028 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 DGKBQ9Y6T7 804 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 CCDC187A0A096LP49 1063 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 GXYLT2A0PJZ3 443 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 TISP43B9A030 160 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 PRRT4C9JH25 899 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 FYB1O15117 783 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 LARGE1O95461 756 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 MT-CO3P00414 261 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 APEHP13798 732 aaKnown RBP4.38□□□□□ -1.71
CAST-229ENST00000510098 MATN1P21941 496 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 CST5P28325 142 aaPredicted RBP4.38□□□□□ -1.71
CAST-229ENST00000510098 JAK3P52333 1124 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 ARL4CP56559 192 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 POU5F1Q01860 360 aaKnown RBP4.38□□□□□ -1.71
CAST-229ENST00000510098 CFHR3Q02985 330 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 PPFIA1Q13136 1202 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 SIM2Q14190 667 aaPredicted RBP4.38□□□□□ -1.71
CAST-229ENST00000510098 KCNB1Q14721 858 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 MFSD13AQ14CX5 517 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 SLC4A8Q2Y0W8 1093 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 ADCK5Q3MIX3 580 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 TRIM60Q495X7 471 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 ACSM6Q6P461 480 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 ZNF66Q6ZN08 573 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 MMS22LQ6ZRQ5 1243 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 DCDC5Q6ZRR9 648 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 RINLQ6ZS11 566 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 BCDIN3DQ7Z5W3 292 aaKnown RBP4.38□□□□□ -1.71
CAST-229ENST00000510098 OR52L2PQ8NGH6 319 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 GOLGA1Q92805 767 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 EDC3Q96F86 508 aaKnown RBP4.38□□□□□ -1.71
CAST-229ENST00000510098 FYTTD1Q96QD9 318 aaKnown RBP4.38□□□□□ -1.71
CAST-229ENST00000510098 PAAF1Q9BRP4 392 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 VPS16Q9H269 839 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 NRIP3Q9NQ35 241 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 ITM2CQ9NQX7 267 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 LIN7CQ9NUP9 197 aaKnown RBP4.38□□□□□ -1.71
CAST-229ENST00000510098 KIF17Q9P2E2 1029 aa4.38□□□□□ -1.71
CAST-229ENST00000510098 SRP68Q9UHB9 627 aaKnown RBP4.38□□□□□ -1.71
CAST-229ENST00000510098 FNDC1Q4ZHG4 1894 aaPredicted RBP4.38□□□□□ -1.71
CAST-229ENST00000510098 FAM90A18PA6NE21 464 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 FAM90A16PA6NEW6 464 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 FAM90A9PA6NNJ1 464 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 FAM90A5PA8MXJ8 464 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 UBE2Q2LH0YL09 131 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 H7C1Q1 480 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 CLIC1O00299 241 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 TCERG1O14776 1098 aaKnown RBP4.37□□□□□ -1.71
CAST-229ENST00000510098 LATS1O95835 1130 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 FAM90A15PP0C7V4 464 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 FAM90A14PP0C7W9 464 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 SERPINA4P29622 427 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 DDIT3P35638 169 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 PRKAA2P54646 552 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 GEMIN4P57678 1058 aaKnown RBP4.37□□□□□ -1.71
CAST-229ENST00000510098 WDR5P61964 334 aaKnown RBP4.37□□□□□ -1.71
CAST-229ENST00000510098 FAM187BQ17R55 369 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 AAK1Q2M2I8 961 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 CERKLQ49MI3 558 aaPredicted RBP4.37□□□□□ -1.71
CAST-229ENST00000510098 CC2D1BQ5T0F9 858 aaKnown RBP4.37□□□□□ -1.71
CAST-229ENST00000510098 VSTM1Q6UX27 236 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 CHSY1Q86X52 802 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 ANKRD18AQ8IVF6 992 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 LINC01465Q8N7H1 131 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 PNLDC1Q8NA58 520 aaKnown RBP4.37□□□□□ -1.71
CAST-229ENST00000510098 C1orf131Q8NDD1 294 aaKnown RBP4.37□□□□□ -1.71
CAST-229ENST00000510098 PPHLN1Q8NEY8 458 aaKnown RBP4.37□□□□□ -1.71
CAST-229ENST00000510098 OR6Y1Q8NGX8 325 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 SMG7Q92540 1137 aaKnown RBP4.37□□□□□ -1.71
CAST-229ENST00000510098 NPIPB3Q92617 1050 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 NEUROD6Q96NK8 337 aa4.37□□□□□ -1.71
CAST-229ENST00000510098 DDX23Q9BUQ8 820 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms