RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 ZBTB24O43167 697 aaPredicted RBP18.64■□□□□ 0.57
TPM3-220ENST00000509601 ITPKAP23677 461 aa18.64■□□□□ 0.57
TPM3-220ENST00000509601 SLC11A2P49281 568 aa18.64■□□□□ 0.57
TPM3-220ENST00000509601 YWHAZP63104 245 aaKnown RBP18.64■□□□□ 0.57
TPM3-220ENST00000509601 PDCLQ13371 301 aa18.64■□□□□ 0.57
TPM3-220ENST00000509601 NNTQ13423 1086 aa18.64■□□□□ 0.57
TPM3-220ENST00000509601 CT47A1Q5JQC4 288 aaPredicted RBP18.64■□□□□ 0.57
TPM3-220ENST00000509601 IL31Q6EBC2 164 aa18.64■□□□□ 0.57
TPM3-220ENST00000509601 SLC36A4Q6YBV0 504 aa18.64■□□□□ 0.57
TPM3-220ENST00000509601 TAC4Q86UU9 113 aa18.64■□□□□ 0.57
TPM3-220ENST00000509601 SYT12Q8IV01 421 aa18.64■□□□□ 0.57
TPM3-220ENST00000509601 FAM114A1Q8IWE2 563 aa18.64■□□□□ 0.57
TPM3-220ENST00000509601 SERPINB11Q96P15 392 aa18.64■□□□□ 0.57
TPM3-220ENST00000509601 CIPCQ9C0C6 399 aa18.64■□□□□ 0.57
TPM3-220ENST00000509601 PILRBQ9UKJ0 227 aa18.64■□□□□ 0.57
TPM3-220ENST00000509601 TNRC6BQ9UPQ9 1833 aaKnown RBP18.63■□□□□ 0.57
TPM3-220ENST00000509601 CEP192Q8TEP8 1941 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 C4orf47A7E2U8 309 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 CDX4O14627 284 aaPredicted RBP18.63■□□□□ 0.57
TPM3-220ENST00000509601 IRAK2O43187 625 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 AP5Z1O43299 807 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 TBL1XO60907 577 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 IGLV3-25P01717 112 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 PNMA6AP0CW24 399 aaPredicted RBP18.63■□□□□ 0.57
TPM3-220ENST00000509601 PRKCHP24723 683 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 CD70P32970 193 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 COPAP53621 1224 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 PITX1P78337 314 aaPredicted RBP18.63■□□□□ 0.57
TPM3-220ENST00000509601 RPL6Q02878 288 aaKnown RBP18.63■□□□□ 0.57
TPM3-220ENST00000509601 PTK2Q05397 1052 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 STARD3Q14849 445 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 PTPRNQ16849 979 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 PPM1JQ5JR12 505 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 PEAR1Q5VY43 1037 aaPredicted RBP18.63■□□□□ 0.57
TPM3-220ENST00000509601 CHST9Q7L1S5 443 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 SLC47A2Q86VL8 602 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 TMPRSS6Q8IU80 811 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 SLC41A1Q8IVJ1 513 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 FAM71AQ8IYT1 594 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 GPT2Q8TD30 523 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 ZNF419Q96HQ0 510 aaPredicted RBP18.63■□□□□ 0.57
TPM3-220ENST00000509601 CPXM1Q96SM3 734 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 EDEM2Q9BV94 578 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 LSM14BQ9BX40 385 aaKnown RBP18.63■□□□□ 0.57
TPM3-220ENST00000509601 LHX5Q9H2C1 402 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 TMEM245Q9H330 911 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 PRDM16Q9HAZ2 1276 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 POPDC2Q9HBU9 364 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 ITM2CQ9NQX7 267 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 ABCB8Q9NUT2 735 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 EVLQ9UI08 416 aaPredicted RBP18.63■□□□□ 0.57
TPM3-220ENST00000509601 DACH1Q9UI36 760 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 XPO7Q9UIA9 1087 aaKnown RBP18.63■□□□□ 0.57
TPM3-220ENST00000509601 GGA2Q9UJY4 613 aa18.63■□□□□ 0.57
TPM3-220ENST00000509601 TRUB2O95900 331 aaKnown RBP18.62■□□□□ 0.57
TPM3-220ENST00000509601 PABPC1P11940 636 aaKnown RBP18.62■□□□□ 0.57
TPM3-220ENST00000509601 HLA-EP13747 358 aa18.62■□□□□ 0.57
TPM3-220ENST00000509601 PRKCSHP14314 528 aaPredicted RBP18.62■□□□□ 0.57
TPM3-220ENST00000509601 RPS24P62847 133 aaKnown RBP18.62■□□□□ 0.57
TPM3-220ENST00000509601 ZNF33AQ06730 810 aa18.62■□□□□ 0.57
TPM3-220ENST00000509601 ZC3H12AQ5D1E8 599 aaKnown RBP18.62■□□□□ 0.57
TPM3-220ENST00000509601 MS4A13Q5J8X5 152 aa18.62■□□□□ 0.57
TPM3-220ENST00000509601 KLHDC7AQ5VTJ3 777 aa18.62■□□□□ 0.57
TPM3-220ENST00000509601 LYSMD4Q5XG99 296 aa18.62■□□□□ 0.57
TPM3-220ENST00000509601 FIBINQ8TAL6 211 aa18.62■□□□□ 0.57
TPM3-220ENST00000509601 WFIKKN2Q8TEU8 576 aa18.62■□□□□ 0.57
TPM3-220ENST00000509601 CYB5D2Q8WUJ1 264 aa18.62■□□□□ 0.57
TPM3-220ENST00000509601 PPP1R13BQ96KQ4 1090 aa18.62■□□□□ 0.57
TPM3-220ENST00000509601 PRICKLE1Q96MT3 831 aaPredicted RBP18.62■□□□□ 0.57
TPM3-220ENST00000509601 NUCKS1Q9H1E3 243 aaKnown RBP18.62■□□□□ 0.57
TPM3-220ENST00000509601 KCNJ18B7U540 433 aa18.61■□□□□ 0.57
TPM3-220ENST00000509601 CAPN9O14815 690 aa18.61■□□□□ 0.57
TPM3-220ENST00000509601 EPHX1P07099 455 aa18.61■□□□□ 0.57
TPM3-220ENST00000509601 C7P10643 843 aa18.61■□□□□ 0.57
TPM3-220ENST00000509601 KCNJ12Q14500 433 aa18.61■□□□□ 0.57
TPM3-220ENST00000509601 E2F5Q15329 346 aa18.61■□□□□ 0.57
TPM3-220ENST00000509601 TRIM61Q5EBN2 209 aa18.61■□□□□ 0.57
TPM3-220ENST00000509601 MBLAC2Q68D91 279 aa18.61■□□□□ 0.57
TPM3-220ENST00000509601 SLC23A3Q6PIS1 610 aa18.61■□□□□ 0.57
TPM3-220ENST00000509601 KIAA1324Q6UXG2 1013 aaKnown RBP18.61■□□□□ 0.57
TPM3-220ENST00000509601 RBM43Q6ZSC3 357 aaKnown RBP18.61■□□□□ 0.57
TPM3-220ENST00000509601 PASD1Q8IV76 773 aa18.61■□□□□ 0.57
TPM3-220ENST00000509601 DEFB106AQ8N104 65 aa18.61■□□□□ 0.57
TPM3-220ENST00000509601 DDX1Q92499 740 aaKnown RBP18.61■□□□□ 0.57
TPM3-220ENST00000509601 SLC2A13Q96QE2 648 aa18.61■□□□□ 0.57
TPM3-220ENST00000509601 DDX50Q9BQ39 737 aaKnown RBP18.61■□□□□ 0.57
TPM3-220ENST00000509601 NAA15Q9BXJ9 866 aaKnown RBP18.61■□□□□ 0.57
TPM3-220ENST00000509601 WSB2Q9NYS7 404 aaPredicted RBP18.61■□□□□ 0.57
TPM3-220ENST00000509601 STIM2Q9P246 746 aa18.61■□□□□ 0.57
TPM3-220ENST00000509601 USP36Q9P275 1121 aaKnown RBP18.61■□□□□ 0.57
TPM3-220ENST00000509601 INTS6Q9UL03 887 aaKnown RBP18.61■□□□□ 0.57
TPM3-220ENST00000509601 CKAP5Q14008 2032 aa18.61■□□□□ 0.57
TPM3-220ENST00000509601 SYNCRIPO60506 623 aaKnown RBP18.6■□□□□ 0.57
TPM3-220ENST00000509601 GLI1P08151 1106 aa18.6■□□□□ 0.57
TPM3-220ENST00000509601 ADRB1P08588 477 aa18.6■□□□□ 0.57
TPM3-220ENST00000509601 CAMK2GQ13555 558 aaPredicted RBP18.6■□□□□ 0.57
TPM3-220ENST00000509601 DRAP1Q14919 205 aaPredicted RBP18.6■□□□□ 0.57
TPM3-220ENST00000509601 DCAF6Q58WW2 860 aa18.6■□□□□ 0.57
TPM3-220ENST00000509601 TCP11X2Q5H9J9 407 aa18.6■□□□□ 0.57
TPM3-220ENST00000509601 FSCBQ5H9T9 825 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms