RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 XYLT1Q86Y38 959 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 OLIG1Q8TAK6 271 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 NT5C3BQ969T7 300 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 ZC3H10Q96K80 434 aaKnown RBP16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 LMLNQ96KR4 655 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 NPY6RQ99463 290 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 GABRG3Q99928 467 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 DDX50Q9BQ39 737 aaKnown RBP16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 CBX8Q9HC52 389 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 POLMQ9NP87 494 aaPredicted RBP16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 THAP10Q9P2Z0 257 aaPredicted RBP16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 FRYLO94915 3013 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 GON4LQ3T8J9 2241 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 DCLK1O15075 740 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 TBL1XO60907 577 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 UNGP13051 313 aaPredicted RBP16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 GBP1P32455 592 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 SCNN1AP37088 669 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 MATKP42679 507 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 RNASE9P60153 205 aaKnown RBP16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 ENPP2Q13822 863 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 SKOR2Q2VWA4 1001 aaPredicted RBP16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 C2CD6Q53TS8 623 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 NAA35Q5VZE5 725 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 LAIR1Q6GTX8 287 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 SDE2Q6IQ49 451 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 ANO7Q6IWH7 933 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 CEP68Q76N32 757 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 CACNA2D4Q7Z3S7 1137 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 IRF2BP2Q7Z5L9 587 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 KBTBD6Q86V97 674 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 CHPFQ8IZ52 775 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 FAM160A2Q8N612 972 aaPredicted RBP16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 MDGA1Q8NFP4 955 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 FIBINQ8TAL6 211 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 IPO4Q8TEX9 1081 aaKnown RBP16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 BTN2A3PQ96KV6 586 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 PRMT1Q99873 361 aaKnown RBP16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 ADAM33Q9BZ11 813 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 NUCKS1Q9H1E3 243 aaKnown RBP16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 CALCOCO1Q9P1Z2 691 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 TMEM59LQ9UK28 342 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 RAB23Q9ULC3 237 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 INVSQ9Y283 1065 aa16.74■□□□□ 0.27
PDLIM5-212ENST00000509333 A0A1B0GTH6 734 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 FAM170AA1A519 330 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 ALDH1A2O94788 518 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 RETP07949 1114 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 SLC2A3P11169 496 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 MMP8P22894 467 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 RPS24P62847 133 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 PLK5Q496M5 336 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 FILIP1LQ4L180 1135 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 USP39Q53GS9 565 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 KIAA1211LQ6NV74 962 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 ADIPOR2Q86V24 386 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 DDIT4Q9NX09 232 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 CACNA2D2Q9NY47 1150 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 STIM2Q9P246 746 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 NCDNQ9UBB6 729 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 SLC12A6Q9UHW9 1150 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 STON1Q9Y6Q2 735 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 CFAP54Q96N23 3096 aa16.73■□□□□ 0.27
PDLIM5-212ENST00000509333 SPTBN4Q9H254 2564 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 M0QYT0 321 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 NPC1O15118 1278 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 DAB1O75553 588 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 MOCS2O96007 188 aaPredicted RBP16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 APOEP02649 317 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 TFE3P19532 575 aaPredicted RBP16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 TACR2P21452 398 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 CCR1P32246 355 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 CXCR3P49682 368 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 ARID5AQ03989 594 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 EIF4HQ15056 248 aaKnown RBP16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 OTUD1Q5VV17 481 aaPredicted RBP16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 TRIM72Q6ZMU5 477 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 ARCQ7LC44 396 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 ANKS1BQ7Z6G8 1248 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 CFAP52Q8N1V2 620 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 ATP6V0D2Q8N8Y2 350 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 SLC30A5Q8TAD4 765 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 WFDC5Q8TCV5 224 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 UCMAQ8WVF2 138 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 SORCS1Q8WY21 1168 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 BAP1Q92560 729 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 LOXL4Q96JB6 756 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 AGPAT1Q99943 283 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 DUSP15Q9H1R2 295 aaPredicted RBP16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 FAM204AQ9H8W3 233 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 RRN3Q9NYV6 651 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 KIAA1549LQ6ZVL6 1849 aa16.72■□□□□ 0.27
PDLIM5-212ENST00000509333 SYNJ2BP-COX16A0A087WUM0 186 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 A0A1W2PQC6 194 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 TCRBV21S2A2A0A5A6 115 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 CAVIN2O95810 425 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 HOXB2P14652 356 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 GABRG2P18507 467 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms