RNA–Protein interactions for RNA: ENST00000509290.1

SEL1L3-205, Transcript of SEL1L family member 3, humanhuman

TSL 2

Gene SEL1L3, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-205ENST00000509290 NXPH1P58417 271 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 KIF23Q02241 960 aaPredicted RBP4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 TFF2Q03403 129 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 ITIH3Q06033 890 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 SPP2Q13103 211 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 TNFAIP1Q13829 316 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 VGLL4Q14135 290 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 FAM83BQ5T0W9 1011 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 NECAB2Q7Z6G3 386 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 SCYL3Q8IZE3 742 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 ADGRF4Q8IZF3 695 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 GMCL1P1Q8NEA9 526 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 NSUN6Q8TEA1 469 aaKnown RBP4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 RFKQ969G6 155 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 COA7Q96BR5 231 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 DCPSQ96C86 337 aaKnown RBP4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 PBKQ96KB5 322 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 WDR90Q96KV7 1748 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 TEKT5Q96M29 485 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 HAPLN3Q96S86 360 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 SPZ1Q9BXG8 430 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 VCPKMTQ9H867 229 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 ZNF287Q9HBT7 754 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 VAT1LQ9HCJ6 419 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 VPS54Q9P1Q0 977 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 CALCOCO1Q9P1Z2 691 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 AFG3L2Q9Y4W6 797 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 STK36Q9NRP7 1315 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 VPS37CA5D8V6 355 aaPredicted RBP4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 KLHL33A6NCF5 533 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 BTBD18B2RXH4 712 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 NT5C1B-RDH14C9J2C7 533 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 TMEM232C9JQI7 657 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 F2RL2O00254 374 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 CPLX1O14810 134 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 XPOTO43592 962 aaKnown RBP4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 URI1O94763 535 aaPredicted RBP4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 CALM1P0DP23 149 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 CALM2P0DP24 149 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 CALM3P0DP25 149 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 MYBL2P10244 700 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 SCG2P13521 617 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 MALP21145 153 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 U2AF2P26368 475 aaKnown RBP eCLIP4.75□□□□□ -1.652e-6■■■■□ 19.7
SEL1L3-205ENST00000509290 PCSK6P29122 969 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 NT5C2P49902 561 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 HMGN5P82970 282 aaKnown RBP4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 PFKFB3Q16875 520 aaPredicted RBP4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 QRICH1Q2TAL8 776 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 SUPT20HL1Q3ZLR7 823 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 LCE1AQ5T7P2 110 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 SYNE3Q6ZMZ3 975 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 PNMA8AQ86V59 439 aaPredicted RBP4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 CTCFLQ8NI51 663 aaPredicted RBP4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 TBC1D5Q92609 795 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 SMOQ99835 787 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 VRK1Q99986 396 aaPredicted RBP4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 RNF26Q9BY78 433 aaPredicted RBP4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 SMOC2Q9H3U7 446 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 LMBRD1Q9NUN5 540 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 RBM28Q9NW13 759 aaKnown RBP4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 ETAA1Q9NY74 926 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 SERGEFQ9UGK8 458 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 CNPY2Q9Y2B0 182 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 ZHX2Q9Y6X8 837 aa4.75□□□□□ -1.65
SEL1L3-205ENST00000509290 A0A0B4J269 797 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 CCDC196A0A1B0GTZ2 297 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 LINC01548A6NM66 108 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 GCOM1H8Y6P7 765 aaPredicted RBP4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 DHX16O60231 1041 aaKnown RBP4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 CLSTN1O94985 981 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 DEXIO95424 95 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 MMP1P03956 469 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 ASNSP08243 561 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 ITGB6P18564 788 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 VCAM1P19320 739 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 DRD4P21917 467 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 SMARCA1P28370 1054 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 KIF5BP33176 963 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 SLC1A4P43007 532 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 HMGCS2P54868 508 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 BACE1P56817 501 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 PSMC1P62191 440 aaKnown RBP4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 NUCB2P80303 420 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 DSC2Q02487 901 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 SNAPC2Q13487 334 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 TUBB3Q13509 450 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 PPP2R5BQ15173 497 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 PCBP2Q15366 365 aaKnown RBP eCLIP4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 CCDC96Q2M329 555 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 KHDC1Q4VXA5 237 aaKnown RBP4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 ASPRV1Q53RT3 343 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 TREML2Q5T2D2 321 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 SYDE2Q5VT97 1194 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 EGFLAMQ63HQ2 1017 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 SLC30A10Q6XR72 485 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 CAMKK1Q8N5S9 505 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 AOPEPQ8N6M6 819 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 SCAMP4Q969E2 229 aa4.74□□□□□ -1.65
SEL1L3-205ENST00000509290 C8orf76Q96K31 380 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms