RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 SNX2O60749 519 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 SRGAP2O75044 1071 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 SKAP2O75563 359 aaPredicted RBP2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 BAIAP3O94812 1187 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 MBD4O95243 580 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 AGR2O95994 175 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 RPN1P04843 607 aaKnown RBP2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 TGFB3P10600 412 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 KITP10721 976 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 TNFAIP3P21580 790 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 RPS6KB1P23443 525 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 PRKAR1BP31321 381 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 PPM1AP35813 382 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 ARL4CP56559 192 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 HSF1Q00613 529 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 DEUP1Q05D60 604 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 RAB32Q13637 225 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 DAB2IPQ5VWQ8 1189 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 LVRNQ6Q4G3 990 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 DSTYKQ6XUX3 929 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 ANKRD23Q86SG2 305 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 RFX6Q8HWS3 928 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 SYTL1Q8IYJ3 562 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 MMP21Q8N119 569 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 MYCT1Q8N699 235 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 ZNF527Q8NB42 609 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 IL31RAQ8NI17 732 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 PPP1R35Q8TAP8 253 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 BRI3BPQ8WY22 251 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 ZBTB10Q96DT7 871 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 TMEM41AQ96HV5 264 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 TIGD1Q96MW7 591 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 TBCBQ99426 244 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 NUDT16L1Q9BRJ7 211 aaKnown RBP2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 EIF2AQ9BY44 585 aaKnown RBP2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 ZNF518BQ9C0D4 1074 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 MLXIPLQ9NP71 852 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 PNPLA8Q9NP80 782 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 SEMA4BQ9NPR2 832 aaPredicted RBP2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 A1CFQ9NQ94 594 aaKnown RBP2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 ZSCAN32Q9NX65 697 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 RRN3Q9NYV6 651 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 SEMA5BQ9P283 1151 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 RGS17Q9UGC6 210 aaPredicted RBP2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 GJD2Q9UKL4 321 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 USP22Q9UPT9 525 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 A0A1W2PPL8 197 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 A0A1W2PRQ8 180 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 EME2A4GXA9 379 aaPredicted RBP2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 IFITM10A6NMD0 228 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 A8MVJ9 347 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 LACTBL1A8MY62 500 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 NCAM2O15394 837 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 FFAR2O15552 330 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 PHGDHO43175 533 aaKnown RBP2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 FRS3O43559 492 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 RRP9O43818 475 aaKnown RBP2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 CSTBP04080 98 aaKnown RBP2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 PLA2G2AP14555 144 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 TNFSF4P23510 183 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 RXRGP48443 463 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 GPC5P78333 572 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 B4GALNT1Q00973 533 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 PRKG1Q13976 671 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 GALEQ14376 348 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 MFSD13AQ14CX5 517 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 PSMD6Q15008 389 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 CNN3Q15417 329 aaKnown RBP2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 INSCQ1MX18 579 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 ZNF750Q32MQ0 723 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 SLC9C1Q4G0N8 1177 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 WDR45BQ5MNZ6 344 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 SPATA1Q5VX52 437 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 RETSATQ6NUM9 610 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 SWSAP1Q6NVH7 229 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 GSG1LQ6UXU4 331 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 OVCH2Q7RTZ1 564 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 SUGP1Q8IWZ8 645 aaKnown RBP2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 KIAA0319LQ8IZA0 1049 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 MPP5Q8N3R9 675 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 METTL25Q8N6Q8 603 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 C12orf76Q8N812 135 aaPredicted RBP2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 PNPLA1Q8N8W4 532 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 SPSB4Q96A44 273 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 HIC2Q96JB3 615 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 ZBTB45Q96K62 511 aaPredicted RBP2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 HS6ST2Q96MM7 605 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 PPP1R9BQ96SB3 815 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 ZPBPQ9BS86 351 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 COLEC11Q9BWP8 271 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 B3GNT5Q9BYG0 378 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 UNKQ9C0B0 810 aaKnown RBP2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 TMEM8AQ9HCN3 771 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 SMC4Q9NTJ3 1288 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 TBC1D22BQ9NU19 505 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 IRAK4Q9NWZ3 460 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 STK32BQ9NY57 414 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 OGDHLQ9ULD0 1010 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 RIMKLBQ9ULI2 386 aa2.7□□□□□ -1.98
DEPDC1B-204ENST00000509006 MAFFQ9ULX9 164 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms