RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 GRAP2O75791 330 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 LATS1O95835 1130 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 HLA-EP13747 358 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 PRKCHP24723 683 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 CLCN1P35523 988 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 RPL34P49207 117 aaKnown RBP15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 RPL6Q02878 288 aaKnown RBP15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 PTK2Q05397 1052 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 KCNMA1Q12791 1236 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 BYSLQ13895 437 aaKnown RBP15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 FUT11Q495W5 492 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 TCP11X2Q5H9J9 407 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 CHST9Q7L1S5 443 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 WDTC1Q8N5D0 677 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 ZNF366Q8N895 744 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 STK32AQ8WU08 396 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 CYB5D2Q8WUJ1 264 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 MYEOVQ96EZ4 313 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 PPP1R13BQ96KQ4 1090 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 MRGPRX1Q96LB2 322 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 PRICKLE1Q96MT3 831 aaPredicted RBP15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 LSM14BQ9BX40 385 aaKnown RBP15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 SLC2A11Q9BYW1 496 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 POPDC2Q9HBU9 364 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 THAP10Q9P2Z0 257 aaPredicted RBP15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 XPO7Q9UIA9 1087 aaKnown RBP15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 STOML2Q9UJZ1 356 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 TLR6Q9Y2C9 796 aa15.39■□□□□ 0.05
UBE2D3-228ENST00000508974 IGHV1OR15-9A0A0B4J2B8 117 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 GFRA2O00451 464 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 SYNCRIPO60506 623 aaKnown RBP15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 FOXD2O60548 495 aaPredicted RBP15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 EPHX1P07099 455 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 CD70P32970 193 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 KRT9P35527 623 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 NUMBP49757 651 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 YWHAZP63104 245 aaKnown RBP15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 FOXK2Q01167 660 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 RING1Q06587 406 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 MEA1Q16626 185 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 FNDC3BQ53EP0 1204 aaKnown RBP15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 DCAF6Q58WW2 860 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 ZC3H12AQ5D1E8 599 aaKnown RBP15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 PIK3R6Q5UE93 754 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 LYSMD4Q5XG99 296 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 IL31Q6EBC2 164 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 OR6B2Q6IFH4 312 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 SERPINA13PQ6UXR4 307 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 FAM183BPQ6ZVS7 135 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 TMEM110Q86TL2 294 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 CFAP52Q8N1V2 620 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 CARNMT1Q8N4J0 409 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 MS4A3Q96HJ5 214 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 DCBLD2Q96PD2 775 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 EDEM2Q9BV94 578 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 NUCKS1Q9H1E3 243 aaKnown RBP15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 VPS16Q9H269 839 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 PDCL3Q9H2J4 239 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 SYNCQ9H7C4 482 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 FAM204AQ9H8W3 233 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 GGA2Q9UJY4 613 aa15.38■□□□□ 0.05
UBE2D3-228ENST00000508974 LNP1A1A4G5 178 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 GOLGA6L22H0YM25 854 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 AP5Z1O43299 807 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 TRUB2O95900 331 aaKnown RBP15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 APOEP02649 317 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 ERBB2P04626 1255 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 ITPKAP23677 461 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 KLK7P49862 253 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 ZNF445P59923 1031 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 RPS24P62847 133 aaKnown RBP15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 DRAP1Q14919 205 aaPredicted RBP15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 EIF4HQ15056 248 aaKnown RBP15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 STPG1Q5TH74 334 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 TAF3Q5VWG9 929 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 RAP1GAP2Q684P5 730 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 RNF43Q68DV7 783 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 DPY19L2P1Q6NXN4 242 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 C11orf57Q6ZUT1 292 aaPredicted RBP15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 MFN1Q8IWA4 741 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 DEFB106AQ8N104 65 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 TRIM62Q9BVG3 475 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 MKRN2Q9H000 416 aaKnown RBP15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 PRDM16Q9HAZ2 1276 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 TMEM74BQ9NUR3 256 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 PCDHGC3Q9UN70 934 aa15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 NYNRINQ9P2P1 1898 aaKnown RBP15.37■□□□□ 0.05
UBE2D3-228ENST00000508974 TYW5A2RUC4 315 aaKnown RBP15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 KHNYNO15037 678 aaKnown RBP15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 IRAK2O43187 625 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 PABPC1P11940 636 aaKnown RBP15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 EEF1GP26641 437 aaKnown RBP15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 PTPN20Q4JDL3 420 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 PPM1JQ5JR12 505 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 KLHDC7AQ5VTJ3 777 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 MBLAC2Q68D91 279 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 SASS6Q6UVJ0 657 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 MMS22LQ6ZRQ5 1243 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 ADIPOR2Q86V24 386 aa15.36■□□□□ 0.05
UBE2D3-228ENST00000508974 CHSY1Q86X52 802 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms