RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TAF5LO75529 589 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 KRT3P12035 628 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 GFAPP14136 432 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 VAV1P15498 845 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PTPN7P35236 360 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 MAGEA1P43355 309 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 BAG6P46379 1132 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 RAP1GAPP47736 663 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 SCRN3Q0VDG4 424 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PPIL2Q13356 520 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 EDRF1Q3B7T1 1238 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 ARHGAP15Q53QZ3 475 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 TRAPPC3LQ5T215 181 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 ADGRF1Q5T601 910 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 WDR93Q6P2C0 686 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 KCNIP4Q6PIL6 250 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 TXNDC11Q6PKC3 985 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PIK3AP1Q6ZUJ8 805 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 RTL10Q7L3V2 364 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 KCNK18Q7Z418 384 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 ANKRD35Q8N283 1001 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 DTWD2Q8NBA8 298 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 LPCAT1Q8NF37 534 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CLPTM1LQ96KA5 538 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PPP1R13BQ96KQ4 1090 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PRRG4Q9BZD6 226 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CCDC134Q9H6E4 229 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 BCL2L12Q9HB09 334 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 KCNH4Q9UQ05 1017 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 RWDD3Q9Y3V2 267 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 A0A087X0M5 115 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 A0A1B0GX30 115 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 KLRG2A4D1S0 409 aaPredicted RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 B3GALT2O43825 422 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 TLL1O43897 1013 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 MMP20O60882 483 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PALMO75781 387 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 GSTM1P09488 218 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 TNNI3P19429 210 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 LRPAP1P30533 357 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CAP2P40123 477 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CDH15P55291 814 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 KRT85P78386 507 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 OVGP1Q12889 678 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CNGA3Q16281 694 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 GRIK5Q16478 980 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 KLHL35Q6PF15 583 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 IL27RAQ6UWB1 636 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 MARK2Q7KZI7 788 aaKnown RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 SAPCD2Q86UD0 394 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CMIPQ8IY22 773 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 C4orf19Q8IY42 314 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CMTR2Q8IYT2 770 aaKnown RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 SPARTQ8N0X7 666 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 SYNE4Q8N205 404 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 GPR161Q8N6U8 529 aaKnown RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 EFHBQ8N7U6 833 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF397Q8NF99 534 aaPredicted RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 AP2M1Q96CW1 435 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 MNTQ99583 582 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 TMEM120AQ9BXJ8 343 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 AGXT2Q9BYV1 514 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 GREM2Q9H772 168 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 FANCEQ9HB96 536 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 HSPBP1Q9NZL4 362 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 APEX2Q9UBZ4 518 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 DHDHQ9UQ10 334 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 RBM8AQ9Y5S9 174 aaKnown RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 TYW5A2RUC4 315 aaKnown RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 H3BML4 177 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PAGE1O75459 146 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 RFPL3O75679 317 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PRKCBP05771 671 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CYC1P08574 325 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 JUPP14923 745 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 LGALS4P56470 323 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 ABRQ12979 859 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 NFKBIBQ15653 356 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 LRRC24Q50LG9 513 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 TMEM177Q53S58 311 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PPP6R3Q5H9R7 873 aaPredicted RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 DGKKQ5KSL6 1271 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 C6orf183Q5T699 404 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PHF19Q5T6S3 580 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 ATL3Q6DD88 541 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CWC27Q6UX04 472 aaKnown RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 C11orf57Q6ZUT1 292 aaPredicted RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 LRRC8DQ7L1W4 858 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 RAB11FIP2Q7L804 512 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 FIBCD1Q8N539 461 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 SLC15A4Q8N697 577 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 FSIP1Q8NA03 581 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 SLC7A6OSQ96CW6 309 aaPredicted RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 TBC1D7Q9P0N9 293 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 TBC1D30Q9Y2I9 924 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 DAGLAQ9Y4D2 1042 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 SMCO2A6NFE2 343 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 CAPN14A8MX76 684 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 GPR37L1O60883 481 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms