RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 HOMER2Q9NSB8 354 aa3.54□□□□□ -1.84
GYPB-209ENST00000508618 PPP1R3DO95685 299 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 BTF3P20290 206 aaKnown RBP3.53□□□□□ -1.84
GYPB-209ENST00000508618 TCEA1P23193 301 aaKnown RBP3.53□□□□□ -1.84
GYPB-209ENST00000508618 RPS16P62249 146 aaKnown RBP3.53□□□□□ -1.84
GYPB-209ENST00000508618 PIN1Q13526 163 aaPredicted RBP3.53□□□□□ -1.84
GYPB-209ENST00000508618 KCNAB1Q14722 419 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 CNGA2Q16280 664 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 Q5PR19 223 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 C9orf57Q5W0N0 161 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 APOA5Q6Q788 366 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 RHPN2Q8IUC4 686 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 OR52L2PQ8NGH6 319 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 WBP2Q969T9 261 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 URB1-AS1Q96HZ7 61 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 MSLNLQ96KJ4 702 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 TRIM2Q9C040 744 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 CDT1Q9H211 546 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 MAP6D1Q9H9H5 199 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 PLAC1Q9HBJ0 212 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 SPAG4Q9NPE6 437 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 AASDHPPTQ9NRN7 309 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 COL20A1Q9P218 1284 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 UTS2RQ9UKP6 389 aa3.53□□□□□ -1.84
GYPB-209ENST00000508618 G3BP2Q9UN86 482 aaKnown RBP3.53□□□□□ -1.84
GYPB-209ENST00000508618 SBNO2Q9Y2G9 1366 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 DPPA5A6NC42 116 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 OR6C75A6NL08 312 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 SPRY3O43610 288 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 DDNO94850 711 aaPredicted RBP3.52□□□□□ -1.85
GYPB-209ENST00000508618 CPA1P15085 419 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 IGHMBP2P38935 993 aaKnown RBP3.52□□□□□ -1.85
GYPB-209ENST00000508618 GAD2Q05329 585 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 POU5F1BQ06416 359 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 KIF5AQ12840 1032 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 MRGPRG-AS1Q2M3A8 158 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.52□□□□□ -1.85
GYPB-209ENST00000508618 TTC39AQ5SRH9 613 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 FAM90A2PQ658T7 463 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 PRSS57Q6UWY2 283 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 LAS2Q8IYD9 372 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 CLASRPQ8N2M8 674 aaKnown RBP3.52□□□□□ -1.85
GYPB-209ENST00000508618 OR52N4Q8NGI2 321 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 GLMPQ8WWB7 406 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 ELOVL1Q9BW60 279 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 DDX56Q9NY93 547 aaKnown RBP3.52□□□□□ -1.85
GYPB-209ENST00000508618 LAMP3Q9UQV4 416 aa3.52□□□□□ -1.85
GYPB-209ENST00000508618 A0A0B4J293 547 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 DENND3A2RUS2 1198 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 RHODO00212 210 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 SLC16A5O15375 505 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 IL18RAPO95256 599 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 MMP8P22894 467 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 SLC8A1P32418 973 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 CARSP49589 748 aaKnown RBP3.51□□□□□ -1.85
GYPB-209ENST00000508618 SEC61A1P61619 476 aaKnown RBP3.51□□□□□ -1.85
GYPB-209ENST00000508618 POU3F1Q03052 451 aaPredicted RBP3.51□□□□□ -1.85
GYPB-209ENST00000508618 ANXA2RQ3ZCQ2 193 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 C3orf38Q5JPI3 329 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 KIAA1755Q5JYT7 1200 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 C8orf82Q6P1X6 216 aaPredicted RBP3.51□□□□□ -1.85
GYPB-209ENST00000508618 SPSB3Q6PJ21 355 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 KYAT3Q6YP21 454 aaKnown RBP3.51□□□□□ -1.85
GYPB-209ENST00000508618 SLC25A32Q9H2D1 315 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 AAMDCQ9H7C9 122 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 PCDH12Q9NPG4 1184 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 TPCN1Q9ULQ1 816 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 L1RE1Q9UN81 338 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 COL4A3BPQ9Y5P4 624 aa3.51□□□□□ -1.85
GYPB-209ENST00000508618 PRPF3O43395 683 aaKnown RBP3.5□□□□□ -1.85
GYPB-209ENST00000508618 KCNQ3O43525 872 aa3.5□□□□□ -1.85
GYPB-209ENST00000508618 KRT36O76013 467 aa3.5□□□□□ -1.85
GYPB-209ENST00000508618 MAP4K4O95819 1239 aaPredicted RBP3.5□□□□□ -1.85
GYPB-209ENST00000508618 HOXD3P31249 432 aaPredicted RBP3.5□□□□□ -1.85
GYPB-209ENST00000508618 PBX1P40424 430 aa3.5□□□□□ -1.85
GYPB-209ENST00000508618 STAT6P42226 847 aa3.5□□□□□ -1.85
GYPB-209ENST00000508618 DSC1Q08554 894 aa3.5□□□□□ -1.85
GYPB-209ENST00000508618 CNN3Q15417 329 aaKnown RBP3.5□□□□□ -1.85
GYPB-209ENST00000508618 FAM76BQ5HYJ3 339 aa3.5□□□□□ -1.85
GYPB-209ENST00000508618 DHRS13Q6UX07 377 aa3.5□□□□□ -1.85
GYPB-209ENST00000508618 EPM2AIP1Q7L775 607 aaPredicted RBP3.5□□□□□ -1.85
GYPB-209ENST00000508618 C16orf82Q7Z2V1 217 aa3.5□□□□□ -1.85
GYPB-209ENST00000508618 OVCA2Q8WZ82 227 aa3.5□□□□□ -1.85
GYPB-209ENST00000508618 ISCUQ9H1K1 167 aa3.5□□□□□ -1.85
GYPB-209ENST00000508618 FZD10Q9ULW2 581 aa3.5□□□□□ -1.85
GYPB-209ENST00000508618 VPS4AQ9UN37 437 aa3.5□□□□□ -1.85
GYPB-209ENST00000508618 DTX4Q9Y2E6 619 aa3.5□□□□□ -1.85
GYPB-209ENST00000508618 PCDHB2Q9Y5E7 798 aa3.5□□□□□ -1.85
GYPB-209ENST00000508618 SRRM3A6NNA2 597 aaPredicted RBP3.49□□□□□ -1.85
GYPB-209ENST00000508618 INAFM1C9JVW0 142 aa3.49□□□□□ -1.85
GYPB-209ENST00000508618 RGS14O43566 566 aa3.49□□□□□ -1.85
GYPB-209ENST00000508618 LCATP04180 440 aa3.49□□□□□ -1.85
GYPB-209ENST00000508618 FCGR1AP12314 374 aa3.49□□□□□ -1.85
GYPB-209ENST00000508618 PCYT1AP49585 367 aa3.49□□□□□ -1.85
GYPB-209ENST00000508618 FMO1Q01740 532 aa3.49□□□□□ -1.85
GYPB-209ENST00000508618 COASYQ13057 564 aa3.49□□□□□ -1.85
GYPB-209ENST00000508618 ZNF718Q3SXZ3 478 aa3.49□□□□□ -1.85
GYPB-209ENST00000508618 PRAMEF19Q5SWL8 479 aa3.49□□□□□ -1.85
GYPB-209ENST00000508618 WBP2NLQ6ICG8 309 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms