RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 KCNH6Q9H252 994 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 NHEJ1Q9H9Q4 299 aaPredicted RBP9.48□□□□□ -0.89
NUP54-207ENST00000508583 DNAJC17Q9NVM6 304 aaKnown RBP9.48□□□□□ -0.89
NUP54-207ENST00000508583 COX16Q9P0S2 106 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 CNOT8Q9UFF9 292 aaKnown RBP9.48□□□□□ -0.89
NUP54-207ENST00000508583 KMT2EQ8IZD2 1858 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 A0A087X0T9 212 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 GOLGA6L3A6NEY3 463 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 OTOL1A6NHN0 477 aaPredicted RBP9.47□□□□□ -0.89
NUP54-207ENST00000508583 AP5Z1O43299 807 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 NRDCO43847 1150 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 PENKP01210 267 aaPredicted RBP9.47□□□□□ -0.89
NUP54-207ENST00000508583 FAM228BP0C875 321 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 TARSP26639 723 aaKnown RBP9.47□□□□□ -0.89
NUP54-207ENST00000508583 CYLC1P35663 651 aaPredicted RBP9.47□□□□□ -0.89
NUP54-207ENST00000508583 TNFRSF4P43489 277 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 SOX9P48436 509 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 ATP11AP98196 1134 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 MAMLD1Q13495 774 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 EIF4EBP2Q13542 120 aaPredicted RBP9.47□□□□□ -0.89
NUP54-207ENST00000508583 SPA17Q15506 151 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 CWF19L1Q69YN2 538 aaKnown RBP9.47□□□□□ -0.89
NUP54-207ENST00000508583 WDR59Q6PJI9 974 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 TMTC1Q8IUR5 882 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 CCDC105Q8IYK2 499 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 TXLNBQ8N3L3 684 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 EMC1Q8N766 993 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 TC2NQ8N9U0 490 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 FAM172AQ8WUF8 416 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 UCMAQ8WVF2 138 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 ACDQ96AP0 544 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 CLDN23Q96B33 292 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 C1orf74Q96LT6 269 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 HAPLN3Q96S86 360 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 TBCBQ99426 244 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 LRFN3Q9BTN0 628 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 FOXQ1Q9C009 403 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 TKTL2Q9H0I9 626 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 IRF2BPLQ9H1B7 796 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 RETREG1Q9H6L5 497 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 ARHGEF4Q9NR80 690 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 PIGVQ9NUD9 493 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 ARHGEF38Q9NXL2 777 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 DONSONQ9NYP3 566 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 TAS2R14Q9NYV8 317 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 UVRAGQ9P2Y5 699 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 HCN4Q9Y3Q4 1203 aa9.47□□□□□ -0.89
NUP54-207ENST00000508583 TCRBV5S1A1TA0A578 114 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 TBC1D3BA6NDS4 549 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 EIF3CLB5ME19 914 aaKnown RBP9.46□□□□□ -0.9
NUP54-207ENST00000508583 NPC1O15118 1278 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 TIMM44O43615 452 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 TULP3O75386 442 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 ENDOD1O94919 500 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 KAT7O95251 611 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 PLEKP08567 350 aaPredicted RBP9.46□□□□□ -0.9
NUP54-207ENST00000508583 H2AFZP0C0S5 128 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 CD72P21854 359 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 PSMA2P25787 234 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 AVPR2P30518 371 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 RFC1P35251 1148 aaPredicted RBP9.46□□□□□ -0.9
NUP54-207ENST00000508583 DGKGP49619 791 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 GALK1P51570 392 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 CCR3P51677 355 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 VCPP55072 806 aaKnown RBP9.46□□□□□ -0.9
NUP54-207ENST00000508583 GFPT1Q06210 699 aaPredicted RBP9.46□□□□□ -0.9
NUP54-207ENST00000508583 CDH18Q13634 790 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 CCINQ13939 588 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 PIGHQ14442 188 aaPredicted RBP9.46□□□□□ -0.9
NUP54-207ENST00000508583 EIF4HQ15056 248 aaKnown RBP9.46□□□□□ -0.9
NUP54-207ENST00000508583 CDO1Q16878 200 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 CCDC14Q49A88 953 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 FAM133BQ5BKY9 247 aaKnown RBP9.46□□□□□ -0.9
NUP54-207ENST00000508583 MS4A13Q5J8X5 152 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 EFHC2Q5JST6 749 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 PPP1R15BQ5SWA1 713 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 PIK3R6Q5UE93 754 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 FYB2Q5VWT5 728 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 MAMSTRQ6ZN01 415 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 H2AFVQ71UI9 128 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 BNIPLQ7Z465 357 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 ANKS1BQ7Z6G8 1248 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 ETFBKMTQ8IXQ9 262 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 TERB1Q8NA31 727 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 WFIKKN2Q8TEU8 576 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 CENPIQ92674 756 aaPredicted RBP9.46□□□□□ -0.9
NUP54-207ENST00000508583 WBP2Q969T9 261 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 NTAN1Q96AB6 310 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 CALR3Q96L12 384 aaKnown RBP9.46□□□□□ -0.9
NUP54-207ENST00000508583 RPRD1AQ96P16 312 aaPredicted RBP9.46□□□□□ -0.9
NUP54-207ENST00000508583 EIF3CQ99613 913 aaKnown RBP9.46□□□□□ -0.9
NUP54-207ENST00000508583 CHRDQ9H2X0 955 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 LMAN1LQ9HAT1 526 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 MYO1AQ9UBC5 1043 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 INTUQ9ULD6 942 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 SLC27A6Q9Y2P4 619 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 MYOFQ9NZM1 2061 aa9.46□□□□□ -0.9
NUP54-207ENST00000508583 KIAA1549LQ6ZVL6 1849 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 A0A0A0MRY4 1105 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 A0A1B0GVM2 712 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms