RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 KIF5BP33176 963 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 PHKA1P46020 1223 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 FNTAP49354 379 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 RGS19P49795 217 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 PAPOLAP51003 745 aaKnown RBP4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 ZNF135P52742 658 aaPredicted RBP4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 NAP1L1P55209 391 aaKnown RBP4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 DSC2Q02487 901 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 DEUP1Q05D60 604 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 ITKQ08881 620 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 SLC10A2Q12908 348 aaPredicted RBP4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 STIM1Q13586 685 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 MTMR1Q13613 665 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 CUL3Q13618 768 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 HABP2Q14520 560 aaPredicted RBP4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 TAF7Q15545 349 aaPredicted RBP4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 EMC10Q5UCC4 262 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 HHATQ5VTY9 493 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 TRIM65Q6PJ69 517 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 CACNA2D4Q7Z3S7 1137 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 CEP57Q86XR8 500 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 FAM114A1Q8IWE2 563 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 ARHGEF28Q8N1W1 1705 aaKnown RBP4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 SEMA6DQ8NFY4 1073 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 CCDC12Q8WUD4 166 aaPredicted RBP4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 HDAC7Q8WUI4 952 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 C17orf50Q8WW18 174 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.93□□□□□ -1.621e-6■■■■■ 56.2
PDLIM5-211ENST00000508531 KAT2BQ92831 832 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 TBC1D31Q96DN5 1066 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 MTMR8Q96EF0 704 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 CCDC114Q96M63 670 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 NAP1L3Q99457 506 aaPredicted RBP4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 TSC22D3Q99576 134 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 C1orf43Q9BWL3 253 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 RANBP17Q9H2T7 1088 aaKnown RBP4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 PRDM16Q9HAZ2 1276 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 SIDT1Q9NXL6 827 aaKnown RBP4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 CFAP97Q9P2B7 532 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 CTNNAL1Q9UBT7 734 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 AGAP1Q9UPQ3 857 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 PPP2R2CQ9Y2T4 447 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 CRYBG1Q9Y4K1 1723 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 USP16Q9Y5T5 823 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 GMEB1Q9Y692 573 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 CYP46A1Q9Y6A2 500 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 RPS6KL1Q9Y6S9 549 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 ACEP12821 1306 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 KCPQ6ZWJ8 1503 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 CPDO75976 1380 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 BCL9O00512 1426 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 CPSF1Q10570 1443 aaKnown RBP4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 ANKARQ7Z5J8 1434 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 LRRD1A4D1F6 860 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 VPS37CA5D8V6 355 aaPredicted RBP4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 GOLGA6BA6NDN3 693 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 TMEM232C9JQI7 657 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 E7ENQ6 273 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 E2F6O75461 281 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 FLOT1O75955 427 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 GSTA1P08263 222 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 VIMP08670 466 aaKnown RBP4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 GSTA2P09210 222 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 U2AF1L5P0DN76 240 aaPredicted RBP4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 DESP17661 470 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 SMARCA1P28370 1054 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 GJB2P29033 226 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 TMPOP42166 694 aaKnown RBP4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 RAB27AP51159 221 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 CCNHP51946 323 aaPredicted RBP4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 PDE1AP54750 535 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 MRPS25P82663 173 aaKnown RBP4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 U2AF1Q01081 240 aaKnown RBP eCLIP4.92□□□□□ -1.621e-7■■■■■ 28.2
PDLIM5-211ENST00000508531 TBCCQ15814 346 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 SLC4A8Q2Y0W8 1093 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 CMPK2Q5EBM0 449 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 MTX3Q5HYI7 312 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 PLAC9Q5JTB6 97 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 RBM20Q5T481 1227 aaKnown RBP4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 C1QTNF12Q5T7M4 302 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 TLDC1Q6P9B6 456 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 MTHFD1LQ6UB35 978 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 SEPT14Q6ZU15 432 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 CCDC80Q76M96 950 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 BHLHA9Q7RTU4 235 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 ARHGAP22Q7Z5H3 698 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 PNMA8AQ86V59 439 aaPredicted RBP4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 LMNTD2Q8IXW0 634 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 ARHGAP18Q8N392 663 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 LSM14AQ8ND56 463 aaKnown RBP4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 DYDC1Q8WWB3 177 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 LZTS2Q9BRK4 669 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 CCDC28BQ9BUN5 200 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 CNPPD1Q9BV87 410 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 VCXQ9H320 206 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 VCX3BQ9H321 246 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 EBF2Q9HAK2 575 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 VCX3AQ9NNX9 186 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 RLIMQ9NVW2 624 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 TUBA8Q9NY65 449 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms