RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 GBP4Q96PP9 640 aa12.61□□□□□ -0.39
CLDND1-218ENST00000508503 SLC2A13Q96QE2 648 aa12.61□□□□□ -0.39
CLDND1-218ENST00000508503 TMEM245Q9H330 911 aa12.61□□□□□ -0.39
CLDND1-218ENST00000508503 PLCB1Q9NQ66 1216 aa12.61□□□□□ -0.39
CLDND1-218ENST00000508503 CALCOCO1Q9P1Z2 691 aa12.61□□□□□ -0.39
CLDND1-218ENST00000508503 BCCIPQ9P287 314 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLDND1-218ENST00000508503 TJP2Q9UDY2 1190 aa12.61□□□□□ -0.39
CLDND1-218ENST00000508503 NFE2L3Q9Y4A8 694 aa12.61□□□□□ -0.39
CLDND1-218ENST00000508503 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 IGHV1OR15-9A0A0B4J2B8 117 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 LRRC10BA6NIK2 292 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 TRUB2O95900 331 aaKnown RBP12.6□□□□□ -0.39
CLDND1-218ENST00000508503 GABRB2P47870 512 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 SGSHP51688 502 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 DRAP1Q14919 205 aaPredicted RBP12.6□□□□□ -0.39
CLDND1-218ENST00000508503 FUT11Q495W5 492 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 HSP90AA4PQ58FG1 418 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 MS4A13Q5J8X5 152 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 EFHC1Q5JVL4 640 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 RFWD3Q6PCD5 774 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 TAC4Q86UU9 113 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 SLC47A2Q86VL8 602 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 TMEFF1Q8IYR6 380 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 PGBD3Q8N328 593 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 ZNF557Q8N988 423 aaPredicted RBP12.6□□□□□ -0.39
CLDND1-218ENST00000508503 C12orf50Q8NA57 414 aaPredicted RBP12.6□□□□□ -0.39
CLDND1-218ENST00000508503 ZNF397Q8NF99 534 aaPredicted RBP12.6□□□□□ -0.39
CLDND1-218ENST00000508503 WFDC5Q8TCV5 224 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 DDX1Q92499 740 aaKnown RBP12.6□□□□□ -0.39
CLDND1-218ENST00000508503 TTC17Q96AE7 1141 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 MYEOVQ96EZ4 313 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 DDX50Q9BQ39 737 aaKnown RBP12.6□□□□□ -0.39
CLDND1-218ENST00000508503 STK33Q9BYT3 514 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 MKRN2Q9H000 416 aaKnown RBP12.6□□□□□ -0.39
CLDND1-218ENST00000508503 SMOC1Q9H4F8 434 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 ITM2CQ9NQX7 267 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLDND1-218ENST00000508503 EVLQ9UI08 416 aaPredicted RBP12.6□□□□□ -0.39
CLDND1-218ENST00000508503 RAD54BQ9Y620 910 aa12.6□□□□□ -0.39
CLDND1-218ENST00000508503 MED19A0JLT2 244 aaPredicted RBP12.59□□□□□ -0.39
CLDND1-218ENST00000508503 DCDC2BA2VCK2 349 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 KCNU1A8MYU2 1149 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 CAPN9O14815 690 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 ZBTB24O43167 697 aaPredicted RBP12.59□□□□□ -0.39
CLDND1-218ENST00000508503 MAP3K13O43283 966 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 TBL1XO60907 577 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 IGLV3-19P01714 112 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 PABPC1P11940 636 aaKnown RBP12.59□□□□□ -0.39
CLDND1-218ENST00000508503 UCHL3P15374 230 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 HOXD12P35452 270 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 KRT9P35527 623 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 DPP6P42658 865 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 PTGER3P43115 390 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 COPAP53621 1224 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 PITX1P78337 314 aaPredicted RBP12.59□□□□□ -0.39
CLDND1-218ENST00000508503 CAMK2GQ13555 558 aaPredicted RBP12.59□□□□□ -0.39
CLDND1-218ENST00000508503 STARD3Q14849 445 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 PTPRNQ16849 979 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 AASDHQ4L235 1098 aaPredicted RBP12.59□□□□□ -0.39
CLDND1-218ENST00000508503 ZC3H12AQ5D1E8 599 aaKnown RBP12.59□□□□□ -0.39
CLDND1-218ENST00000508503 STPG1Q5TH74 334 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 OLFML1Q6UWY5 402 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 C11orf57Q6ZUT1 292 aaPredicted RBP12.59□□□□□ -0.39
CLDND1-218ENST00000508503 CYP2U1Q7Z449 544 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 SYT12Q8IV01 421 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 DEFB106AQ8N104 65 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 SORCS1Q8WY21 1168 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 NT5C3BQ969T7 300 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 ZNF419Q96HQ0 510 aaPredicted RBP12.59□□□□□ -0.39
CLDND1-218ENST00000508503 BTN2A3PQ96KV6 586 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 PRICKLE1Q96MT3 831 aaPredicted RBP12.59□□□□□ -0.39
CLDND1-218ENST00000508503 PRMT1Q99873 361 aaKnown RBP12.59□□□□□ -0.39
CLDND1-218ENST00000508503 TMEM74BQ9NUR3 256 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 ABCB8Q9NUT2 735 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 USP36Q9P275 1121 aaKnown RBP12.59□□□□□ -0.39
CLDND1-218ENST00000508503 GGA2Q9UJY4 613 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 PILRBQ9UKJ0 227 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 FHOD1Q9Y613 1164 aa12.59□□□□□ -0.39
CLDND1-218ENST00000508503 CDX4O14627 284 aaPredicted RBP12.58□□□□□ -0.4
CLDND1-218ENST00000508503 KHNYNO15037 678 aaKnown RBP12.58□□□□□ -0.4
CLDND1-218ENST00000508503 AP5Z1O43299 807 aa12.58□□□□□ -0.4
CLDND1-218ENST00000508503 HSF2BPO75031 334 aa12.58□□□□□ -0.4
CLDND1-218ENST00000508503 DLDP09622 509 aaKnown RBP12.58□□□□□ -0.4
CLDND1-218ENST00000508503 PNMA6AP0CW24 399 aaPredicted RBP12.58□□□□□ -0.4
CLDND1-218ENST00000508503 CYP11B1P15538 503 aa12.58□□□□□ -0.4
CLDND1-218ENST00000508503 PRKCHP24723 683 aa12.58□□□□□ -0.4
CLDND1-218ENST00000508503 DHPSP49366 369 aaPredicted RBP12.58□□□□□ -0.4
CLDND1-218ENST00000508503 SNX16P57768 344 aa12.58□□□□□ -0.4
CLDND1-218ENST00000508503 IRX4P78413 519 aa12.58□□□□□ -0.4
CLDND1-218ENST00000508503 CDK17Q00537 523 aa12.58□□□□□ -0.4
CLDND1-218ENST00000508503 SLC6A3Q01959 620 aa12.58□□□□□ -0.4
CLDND1-218ENST00000508503 KRT31Q15323 416 aa12.58□□□□□ -0.4
CLDND1-218ENST00000508503 PTPN20Q4JDL3 420 aa12.58□□□□□ -0.4
CLDND1-218ENST00000508503 DCAF6Q58WW2 860 aa12.58□□□□□ -0.4
CLDND1-218ENST00000508503 TCEAL6Q6IPX3 200 aa12.58□□□□□ -0.4
CLDND1-218ENST00000508503 CHST9Q7L1S5 443 aa12.58□□□□□ -0.4
CLDND1-218ENST00000508503 SLC26A9Q7LBE3 791 aa12.58□□□□□ -0.4
CLDND1-218ENST00000508503 TMPRSS6Q8IU80 811 aa12.58□□□□□ -0.4
CLDND1-218ENST00000508503 ZDHHC17Q8IUH5 632 aa12.58□□□□□ -0.4
CLDND1-218ENST00000508503 AHI1Q8N157 1196 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms