RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 FYNP06241 537 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 EPHX1P07099 455 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 HLA-EP13747 358 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 SLC6A4P31645 630 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 GPD2P43304 727 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 RPL34P49207 117 aaKnown RBP13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 TPMTP51580 245 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 GFPT1Q06210 699 aaPredicted RBP13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 E2F5Q15329 346 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 ST3GAL2Q16842 350 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 NUGGCQ68CJ6 796 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 RFWD3Q6PCD5 774 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 SERPINA13PQ6UXR4 307 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 KIAA0907Q7Z7F0 614 aaPredicted RBP13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 PIP4P1Q86T03 277 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 ADIPOR2Q86V24 386 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 TMPRSS6Q8IU80 811 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 OR2I1PQ8NGU4 316 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 WFDC5Q8TCV5 224 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 WFIKKN2Q8TEU8 576 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 FOXJ1Q92949 421 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 TMA16Q96EY4 203 aaKnown RBP13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 SIPA1Q96FS4 1042 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 PRICKLE1Q96MT3 831 aaPredicted RBP13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 GTPBP2Q9BX10 602 aaKnown RBP13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 SRRTQ9BXP5 876 aaKnown RBP13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 ITM2CQ9NQX7 267 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 ABCB8Q9NUT2 735 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 WSB2Q9NYS7 404 aaPredicted RBP13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 GGA2Q9UJY4 613 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 UPK3BL1B0FP48 263 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 UPK3BL2E5RIL1 263 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 ARHGAP33O14559 1287 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 TIMM44O43615 452 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 KRT37O76014 449 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 C7P10643 843 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 PABPC1P11940 636 aaKnown RBP13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 TBX4P57082 545 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 RING1Q06587 406 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 SEMA3BQ13214 749 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 CAMK2GQ13555 558 aaPredicted RBP13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 MEA1Q16626 185 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 PTPRNQ16849 979 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 MPP7Q5T2T1 576 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 PIK3R6Q5UE93 754 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 CHST9Q7L1S5 443 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 UNC45BQ8IWX7 931 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 RGL4Q8IZJ4 473 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 AHI1Q8N157 1196 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 MINDY1Q8N5J2 469 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 ZNF366Q8N895 744 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 DQX1Q8TE96 717 aaKnown RBP13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 CYB5D2Q8WUJ1 264 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 PRCCQ92733 491 aaPredicted RBP13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 GOLGA1Q92805 767 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 FCRL2Q96LA5 508 aaPredicted RBP13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 GPR174Q9BXC1 333 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 MIS12Q9H081 205 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 TMEM245Q9H330 911 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 NFE2L3Q9Y4A8 694 aa13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 NYNRINQ9P2P1 1898 aaKnown RBP13.53□□□□□ -0.24
HMGCS1-205ENST00000508319 KNL1Q8NG31 2342 aa13.52□□□□□ -0.24
HMGCS1-205ENST00000508319 GOLGA6L7A0A1B0GV03 622 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 IRAK2O43187 625 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 SART1O43290 800 aaKnown RBP13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 ACSL4O60488 711 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 OPHN1O60890 802 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 TBL1XO60907 577 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 GJB3O75712 270 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 KRT5P13647 590 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 MAOBP27338 520 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 CD70P32970 193 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 SLC11A2P49281 568 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 ATXN3P54252 364 aaPredicted RBP13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 ARID5AQ03989 594 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 FOXC1Q12948 553 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 NNTQ13423 1086 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 PLEKHG6Q3KR16 790 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 FNDC3BQ53EP0 1204 aaKnown RBP13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 WDR45BQ5MNZ6 344 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 SYCP2LQ5T4T6 812 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 NADSYN1Q6IA69 706 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 SCUBE3Q8IX30 993 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 CADM4Q8NFZ8 388 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 OR2T3Q8NH03 318 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 DNASE2BQ8WZ79 361 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 AZIN2Q96A70 460 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 MYEOVQ96EZ4 313 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 LMLNQ96KR4 655 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 SERPINB11Q96P15 392 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 MED15Q96RN5 788 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 IRX2Q9BZI1 471 aaPredicted RBP13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 ACP6Q9NPH0 428 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 DNAAF2Q9NVR5 837 aaKnown RBP13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 SUSD2Q9UGT4 822 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 CYTH4Q9UIA0 394 aa13.52□□□□□ -0.25
HMGCS1-205ENST00000508319 MEI4A8MW99 385 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 PAPSS1O43252 624 aaPredicted RBP13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 TOP3BO95985 862 aaKnown RBP13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 DLDP09622 509 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms