RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 PTPRDP23468 1912 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 F9P00740 461 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 KCNJ1P48048 391 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 ZNF143P52747 638 aaPredicted RBP11.39□□□□□ -0.59
PROM1-207ENST00000508167 COG7P83436 770 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 ATP13A4Q4VNC1 1196 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 ANKRD54Q6NXT1 300 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 CCDC137Q6PK04 289 aaKnown RBP11.39□□□□□ -0.59
PROM1-207ENST00000508167 GLIS1Q8NBF1 620 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.39□□□□□ -0.59
PROM1-207ENST00000508167 TCEAL4Q96EI5 215 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 CALN1Q9BXU9 219 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 DHX35Q9H5Z1 703 aaKnown RBP11.39□□□□□ -0.59
PROM1-207ENST00000508167 HMGA1P17096 107 aaKnown RBP11.39□□□□□ -0.59
PROM1-207ENST00000508167 ZC3H12AQ5D1E8 599 aaKnown RBP11.39□□□□□ -0.59
PROM1-207ENST00000508167 PM20D1Q6GTS8 502 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 RTL10Q7L3V2 364 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 ATG4AQ8WYN0 398 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 NCAPGQ9BPX3 1015 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 MAK16Q9BXY0 300 aaKnown RBP11.39□□□□□ -0.59
PROM1-207ENST00000508167 DCLK3Q9C098 648 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 KLHL11Q9NVR0 708 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 RRN3Q9NYV6 651 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 CDH22Q9UJ99 828 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 USP3Q9Y6I4 520 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 LRRD1A4D1F6 860 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 C2orf78A6NCI8 922 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 RWDD2BP57060 319 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 SCD5Q86SK9 330 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 ZNF354CQ86Y25 554 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 CCDC117Q8IWD4 279 aaPredicted RBP11.39□□□□□ -0.59
PROM1-207ENST00000508167 KCTD6Q8NC69 237 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 ACSF2Q96CM8 615 aaPredicted RBP11.39□□□□□ -0.59
PROM1-207ENST00000508167 DPH5Q9H2P9 285 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 CLIC5Q9NZA1 410 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 LCMT1Q9UIC8 334 aa11.39□□□□□ -0.59
PROM1-207ENST00000508167 C2CD4BA6NLJ0 364 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 PSTPIP1O43586 416 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 CREB3O43889 395 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 CCR1P32246 355 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 RDXP35241 583 aaKnown RBP11.38□□□□□ -0.59
PROM1-207ENST00000508167 SLC1A1P43005 524 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 PTK6Q13882 451 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 SLC25A52Q3SY17 297 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 EFHC2Q5JST6 749 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 KCNT1Q5JUK3 1230 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 TAC4Q86UU9 113 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 YAF2Q8IY57 180 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 BHMTQ93088 406 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 ATP6V1G3Q96LB4 118 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 SMG9Q9H0W8 520 aaKnown RBP11.38□□□□□ -0.59
PROM1-207ENST00000508167 KRT1P04264 644 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 IL1R2P27930 398 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 HOXA9P31269 272 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 CHKAP35790 457 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 RAB6CQ53S08 254 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 SH3PXD2AQ5TCZ1 1133 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 RWDD4Q6NW29 188 aaKnown RBP11.38□□□□□ -0.59
PROM1-207ENST00000508167 GAREM2Q75VX8 874 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 MAATS1Q7Z4T9 603 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 DDX23Q9BUQ8 820 aaKnown RBP11.38□□□□□ -0.59
PROM1-207ENST00000508167 ADAM33Q9BZ11 813 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 RAB6CQ9H0N0 254 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 FAM114A2Q9NRY5 505 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 GKN1Q9NS71 199 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.38□□□□□ -0.59
PROM1-207ENST00000508167 CPQQ9Y646 472 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 GOLGA6CA6NDK9 693 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 GOLGA6DP0CG33 693 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 SLC2A3P11169 496 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 LMAN1P49257 510 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 ADAM15Q13444 863 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 CCDC14Q49A88 953 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 KHSRPQ92945 711 aaKnown RBP eCLIP11.38□□□□□ -0.59
PROM1-207ENST00000508167 GPATCH2LQ9NWQ4 482 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 GOLGA6AQ9NYA3 693 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 CD207Q9UJ71 328 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 ERICH4A6NGS2 130 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 COCHO43405 550 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 SCNN1AP37088 669 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 ARSEP51690 589 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 KPNA1P52294 538 aaPredicted RBP11.38□□□□□ -0.59
PROM1-207ENST00000508167 ATXN1P54253 815 aaKnown RBP11.38□□□□□ -0.59
PROM1-207ENST00000508167 PITX1P78337 314 aaPredicted RBP11.38□□□□□ -0.59
PROM1-207ENST00000508167 STXBP5Q5T5C0 1151 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 CCDC70Q6NSX1 233 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 ZNF771Q7L3S4 317 aaPredicted RBP11.38□□□□□ -0.59
PROM1-207ENST00000508167 MAP7D3Q8IWC1 876 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 RHOT1Q8IXI2 618 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 OVCA2Q8WZ82 227 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 TRMT2BQ96GJ1 504 aaKnown RBP11.38□□□□□ -0.59
PROM1-207ENST00000508167 TTLL2Q9BWV7 592 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 TKTL2Q9H0I9 626 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 USP18Q9UMW8 372 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 SNX24Q9Y343 169 aa11.38□□□□□ -0.59
PROM1-207ENST00000508167 EIF3HO15372 352 aaKnown RBP eCLIP11.37□□□□□ -0.59
PROM1-207ENST00000508167 KRT7P08729 469 aa11.37□□□□□ -0.59
PROM1-207ENST00000508167 MIPP30301 263 aa11.37□□□□□ -0.59
PROM1-207ENST00000508167 ARL4AP40617 200 aa11.37□□□□□ -0.59
PROM1-207ENST00000508167 MTHFRP42898 656 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms