RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 TUBGCP2Q9BSJ2 902 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 MTG1Q9BT17 334 aaPredicted RBP7.48□□□□□ -1.21
CLCN3-206ENST00000507875 MAGED2Q9UNF1 606 aaPredicted RBP7.48□□□□□ -1.21
CLCN3-206ENST00000507875 ACTL7BQ9Y614 415 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 WASH4PA8MWX3 477 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 MUSKO15146 869 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 P4HA2O15460 535 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 TGFB1I1O43294 461 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 PAPLNO95428 1278 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 C22orf31O95567 290 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 RARBP10826 455 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 HSD3B1P14060 373 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 GLRA2P23416 452 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 NR2F2P24468 414 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 HOXD13P35453 343 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 KRT20P35900 424 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 MTF1Q14872 753 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 CCL14Q16627 93 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 FSCN1Q16658 493 aaKnown RBP7.47□□□□□ -1.21
CLCN3-206ENST00000507875 CCDC40Q4G0X9 1142 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 ZBTB41Q5SVQ8 909 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 RETSATQ6NUM9 610 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 MTHFD1LQ6UB35 978 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 UNQ6494/PRO21346Q6UXR6 183 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 RSPO2Q6UXX9 243 aaPredicted RBP7.47□□□□□ -1.21
CLCN3-206ENST00000507875 RAD9BQ6WBX8 426 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 ARHGAP36Q6ZRI8 547 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 C16orf59Q7L2K0 433 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 DMRTC2Q8IXT2 367 aaPredicted RBP7.47□□□□□ -1.21
CLCN3-206ENST00000507875 PDCL2Q8N4E4 241 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 DTWD2Q8NBA8 298 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 TRIB2Q92519 343 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 KAT5Q92993 513 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 CD244Q9BZW8 370 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 PCIF1Q9H4Z3 704 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 AGPAT3Q9NRZ7 376 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 ABHD10Q9NUJ1 306 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 TNRC18O15417 2968 aaPredicted RBP7.47□□□□□ -1.21
CLCN3-206ENST00000507875 A0A1W2PQJ5 194 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 DENND3A2RUS2 1198 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 CCDC169A6NNP5 214 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 MSL3P1P0C860 447 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 INSRRP14616 1297 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 HOXC8P31273 242 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 CD68P34810 354 aaPredicted RBP7.47□□□□□ -1.21
CLCN3-206ENST00000507875 PRPF4BQ13523 1007 aaKnown RBP7.47□□□□□ -1.21
CLCN3-206ENST00000507875 IL10RAQ13651 578 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 SURF1Q15526 300 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 IZUMO3Q5VZ72 239 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 INTS8Q75QN2 995 aaKnown RBP7.47□□□□□ -1.21
CLCN3-206ENST00000507875 TMTC1Q8IUR5 882 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 ESX1Q8N693 406 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 NKAIN3Q8N8D7 197 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 WNT8BQ93098 351 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 FBXL18Q96ME1 805 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 DEFB118Q96PH6 123 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 TMPRSS13Q9BYE2 586 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 DNAI2Q9GZS0 605 aa7.47□□□□□ -1.21
CLCN3-206ENST00000507875 ARMCX3Q9UH62 379 aaPredicted RBP7.47□□□□□ -1.21
CLCN3-206ENST00000507875 EIF2B4Q9UI10 523 aaKnown RBP7.47□□□□□ -1.21
CLCN3-206ENST00000507875 MBLAC1A4D2B0 266 aaPredicted RBP7.46□□□□□ -1.21
CLCN3-206ENST00000507875 CAPN8A6NHC0 703 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 H0YHG0 523 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 K7ERI5 159 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 SLC16A4O15374 487 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 ST8SIA5O15466 376 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 SIGLEC6O43699 453 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 HNRNPCP07910 306 aaKnown RBP eCLIP7.46□□□□□ -1.21
CLCN3-206ENST00000507875 FPR2P25090 351 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 ADH6P28332 368 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 GTF2H1P32780 548 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 BCL6P41182 706 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 GNG11P61952 73 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 SARNPP82979 210 aaKnown RBP7.46□□□□□ -1.21
CLCN3-206ENST00000507875 CDK17Q00537 523 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 GRIK4Q16099 956 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 EXOSC6Q5RKV6 272 aaKnown RBP7.46□□□□□ -1.21
CLCN3-206ENST00000507875 EFCAB12Q6NXP0 572 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 C1orf229Q6ZS94 237 aaPredicted RBP7.46□□□□□ -1.21
CLCN3-206ENST00000507875 CEP68Q76N32 757 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 NELFCDQ8IXH7 590 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 CCDC33Q8N5R6 958 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 XXYLT1Q8NBI6 393 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 KLHDC9Q8NEP7 349 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 TSPEARQ8WU66 669 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 DPF3Q92784 378 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 TRIM63Q969Q1 353 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 RNF166Q96A37 237 aaPredicted RBP7.46□□□□□ -1.21
CLCN3-206ENST00000507875 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.46□□□□□ -1.21
CLCN3-206ENST00000507875 NDST4Q9H3R1 872 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 PAK6Q9NQU5 681 aaPredicted RBP7.46□□□□□ -1.21
CLCN3-206ENST00000507875 PRMT7Q9NVM4 692 aaPredicted RBP7.46□□□□□ -1.21
CLCN3-206ENST00000507875 PDP2Q9P2J9 529 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 SUCLA2Q9P2R7 463 aaPredicted RBP7.46□□□□□ -1.21
CLCN3-206ENST00000507875 DPP7Q9UHL4 492 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 BLOC1S6Q9UL45 172 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 KIAA0100Q14667 2235 aaKnown RBP7.46□□□□□ -1.21
CLCN3-206ENST00000507875 ANK1P16157 1881 aa7.46□□□□□ -1.21
CLCN3-206ENST00000507875 ELOA3CA0A087WX78 387 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-206ENST00000507875 SLC12A8A0AV02 714 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms