RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 OMDQ99983 421 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 SYNDIG1Q9H7V2 258 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 SEL1LQ9UBV2 794 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 CLEC4EQ9ULY5 219 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 PDZD2O15018 2839 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 CSMD1Q96PZ7 3565 aa7.59□□□□□ -1.2
VCAN-207ENST00000507162 MYH10P35580 1976 aa7.59□□□□□ -1.2
VCAN-207ENST00000507162 ESPL1Q14674 2120 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 NIPBLQ6KC79 2804 aaeCLIP7.58□□□□□ -1.2
VCAN-207ENST00000507162 TBC1D3DA0A087WVF3 549 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 TBC1D3IA0A087WXS9 549 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 A0A087X0B3 334 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 TBC1D3EA0A087X179 549 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 TBC1D3KA0A087X1G2 549 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 A0A1B0GTL3 188 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 A0A1W2PP55 124 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 TBC1D3FA6NER0 549 aaPredicted RBP7.58□□□□□ -1.2
VCAN-207ENST00000507162 TBC1D3LB9A6J9 549 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 ANKRD63C9JTQ0 380 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 AGRPO00253 132 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 TLR5O60602 858 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 MAGEC1O60732 1142 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 RNASEH2AO75792 299 aaKnown RBP7.58□□□□□ -1.2
VCAN-207ENST00000507162 CDKL5O76039 1030 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 ITGA2BP08514 1039 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 KRT7P08729 469 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 TBC1D3HP0C7X1 549 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 ALPPL2P10696 532 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 HOXB1P14653 301 aaPredicted RBP7.58□□□□□ -1.2
VCAN-207ENST00000507162 WT1P19544 449 aaPredicted RBP7.58□□□□□ -1.2
VCAN-207ENST00000507162 GUCY2CP25092 1073 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 PSMA5P28066 241 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 GNL1P36915 607 aaPredicted RBP7.58□□□□□ -1.2
VCAN-207ENST00000507162 UQCRFS1P47985 274 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 PGFP49763 221 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 MLLT10P55197 1068 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 POLE2P56282 527 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 RBP5P82980 135 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 TOB2Q14106 344 aaPredicted RBP7.58□□□□□ -1.2
VCAN-207ENST00000507162 CDKN3Q16667 212 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 POM121L1PQ3SYA9 428 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 ZNF776Q68DI1 518 aaPredicted RBP7.58□□□□□ -1.2
VCAN-207ENST00000507162 TBC1D3GQ6DHY5 549 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 TBC1D3CQ6IPX1 549 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 NAPEPLDQ6IQ20 393 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 BORAQ6PGQ7 559 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 ZC3H18Q86VM9 953 aaKnown RBP7.58□□□□□ -1.2
VCAN-207ENST00000507162 TICAM1Q8IUC6 712 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 TBC1D3Q8IZP1 549 aaPredicted RBP7.58□□□□□ -1.2
VCAN-207ENST00000507162 C1orf127Q8N9H9 656 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 OR2T34Q8NGX1 318 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 OR14C36Q8NHC7 312 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 GOLGA1Q92805 767 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 MOCOSQ96EN8 888 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 ZNF274Q96GC6 653 aaPredicted RBP7.58□□□□□ -1.2
VCAN-207ENST00000507162 KCNK16Q96T55 309 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 FUCA2Q9BTY2 467 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 TIPINQ9BVW5 301 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 ZNF518BQ9C0D4 1074 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 PABPC3Q9H361 631 aaKnown RBP7.58□□□□□ -1.2
VCAN-207ENST00000507162 SNX25Q9H3E2 840 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 KDM4CQ9H3R0 1056 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 MTG2Q9H4K7 406 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 CAAP1Q9H8G2 361 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 TMEM30AQ9NV96 361 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 EVA1BQ9NVM1 165 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 GDAP2Q9NXN4 497 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 TJP2Q9UDY2 1190 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 SERGEFQ9UGK8 458 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 SUN2Q9UH99 717 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 NUDT5Q9UKK9 219 aa7.58□□□□□ -1.2
VCAN-207ENST00000507162 AGO2Q9UKV8 859 aaKnown RBP7.58□□□□□ -1.2
VCAN-207ENST00000507162 CCDC187A0A096LP49 1063 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 TISP43B9A030 160 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 K7ENM7 598 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 MDM4O15151 490 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 VPS4BO75351 444 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 IL18RAPO95256 599 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 PIGRP01833 764 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 CYBBP04839 570 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 HMBSP08397 361 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 RNF224P0DH78 156 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 PTPN1P18031 435 aaKnown RBP7.57□□□□□ -1.2
VCAN-207ENST00000507162 GNLYP22749 145 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 MAT2AP31153 395 aaKnown RBP7.57□□□□□ -1.2
VCAN-207ENST00000507162 ATP5C1P36542 298 aaKnown RBP7.57□□□□□ -1.2
VCAN-207ENST00000507162 MLLT3P42568 568 aaPredicted RBP7.57□□□□□ -1.2
VCAN-207ENST00000507162 PLA2G4AP47712 749 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 TRAPPC10P48553 1259 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 TUBP50607 506 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 CCR5P51681 352 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 STAT4Q14765 748 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 EIF4HQ15056 248 aaKnown RBP7.57□□□□□ -1.2
VCAN-207ENST00000507162 SNX30Q5VWJ9 437 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 FYB2Q5VWT5 728 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 SLC39A4Q6P5W5 647 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 USP30Q70CQ3 517 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 EFL1Q7Z2Z2 1120 aaKnown RBP7.57□□□□□ -1.2
VCAN-207ENST00000507162 KCNK18Q7Z418 384 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 PRPF39Q86UA1 669 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms