RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 FLT3P36888 993 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 VIPR2P41587 438 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 SULT1E1P49888 294 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 SULT2A1Q06520 285 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 GRSF1Q12849 480 aaKnown RBP eCLIP8.77□□□□□ -1.01
PDGFC-205ENST00000506880 DHCR24Q15392 516 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 EFHC2Q5JST6 749 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 SYPL2Q5VXT5 272 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 HFE2Q6ZVN8 426 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 SETD3Q86TU7 594 aaPredicted RBP8.77□□□□□ -1.01
PDGFC-205ENST00000506880 MIB1Q86YT6 1006 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 ETFBKMTQ8IXQ9 262 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 SYCE1Q8N0S2 351 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.77□□□□□ -1.01
PDGFC-205ENST00000506880 ZNF564Q8TBZ8 553 aaPredicted RBP8.77□□□□□ -1.01
PDGFC-205ENST00000506880 CLEC4CQ8WTT0 213 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 RXFP2Q8WXD0 754 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 EDEM1Q92611 657 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 CLDN23Q96B33 292 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 MCEEQ96PE7 176 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 FBXL21Q9UKT6 434 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 AGO1Q9UL18 857 aaKnown RBP8.77□□□□□ -1.01
PDGFC-205ENST00000506880 CCL26Q9Y258 94 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 STARD13Q9Y3M8 1113 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 ARIH1Q9Y4X5 557 aaPredicted RBP8.77□□□□□ -1.01
PDGFC-205ENST00000506880 ZNF318Q5VUA4 2279 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 GOLGA6L9A6NEM1 432 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 PRR33A8MZF0 331 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 SPECC1L-ADORA2AF8WAN1 911 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 KRT86O43790 486 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 PRPSAP2O60256 369 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 MOCS3O95396 460 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 TBX18O95935 607 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 ASLP04424 464 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 HOXA6P31267 233 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 HOXC13P31276 330 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 ADRA1BP35368 520 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 GRIA2P42262 883 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 MAGEA1P43355 309 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 MAPKAPK2P49137 400 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 VAV2P52735 878 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 PLK1P53350 603 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 CDH4P55283 916 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 GEMIN4P57678 1058 aaKnown RBP8.76□□□□□ -1.01
PDGFC-205ENST00000506880 MRPS21P82921 87 aaKnown RBP8.76□□□□□ -1.01
PDGFC-205ENST00000506880 ZXDBP98169 803 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 CCDC173Q0VFZ6 552 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 KIF5AQ12840 1032 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 CCDC14Q49A88 953 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 TMEM196Q5HYL7 178 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 MS4A13Q5J8X5 152 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 PIK3R6Q5UE93 754 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 C11orf63Q6NUN7 778 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 SLFN11Q7Z7L1 901 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 MAP7D3Q8IWC1 876 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 LRRC8AQ8IWT6 810 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 LZTR1Q8N653 840 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 FIBINQ8TAL6 211 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 UCMAQ8WVF2 138 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 RNF34Q969K3 372 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 ACDQ96AP0 544 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 TMA16Q96EY4 203 aaKnown RBP8.76□□□□□ -1.01
PDGFC-205ENST00000506880 ASIC4Q96FT7 647 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 CHP1Q99653 195 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 EPAS1Q99814 870 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 PRMT1Q99873 361 aaKnown RBP8.76□□□□□ -1.01
PDGFC-205ENST00000506880 NUP85Q9BW27 656 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 FAM126AQ9BYI3 521 aaPredicted RBP8.76□□□□□ -1.01
PDGFC-205ENST00000506880 CATSPERBQ9H7T0 1116 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 HPS4Q9NQG7 708 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 DEC1Q9P2X7 70 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 SFMBT1Q9UHJ3 866 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 CDH22Q9UJ99 828 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.76□□□□□ -1.01
PDGFC-205ENST00000506880 PIAS3Q9Y6X2 628 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 CACNA1HO95180 2353 aa8.76□□□□□ -1.01
PDGFC-205ENST00000506880 CCDC163A0A0D9SF12 145 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 ZSCAN5CA6NGD5 496 aaPredicted RBP8.75□□□□□ -1.01
PDGFC-205ENST00000506880 DRGXA6NNA5 263 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 WASH4PA8MWX3 477 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 CHURC1-FNTBB4DL54 471 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 GOLGA8SH3BPF8 625 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 PROSCO94903 275 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 CALCAP01258 141 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 KLKB1P03952 638 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 APODP05090 189 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 CYP17A1P05093 508 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 ASGR2P07307 311 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 PLEKP08567 350 aaPredicted RBP8.75□□□□□ -1.01
PDGFC-205ENST00000506880 CCDC175P0C221 793 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 PSMA2P25787 234 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 MSNP26038 577 aaKnown RBP8.75□□□□□ -1.01
PDGFC-205ENST00000506880 GJA4P35212 333 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 PGFP49763 221 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 HDAC4P56524 1084 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 YBEYP58557 167 aaPredicted RBP8.75□□□□□ -1.01
PDGFC-205ENST00000506880 GFPT1Q06210 699 aaPredicted RBP8.75□□□□□ -1.01
PDGFC-205ENST00000506880 SLC20A2Q08357 652 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 PDK2Q15119 407 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 FAM133BQ5BKY9 247 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms