RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 PDK1Q15118 436 aa17.58■□□□□ 0.4
SQSTM1-211ENST00000506690 SLC44A4Q53GD3 710 aa17.58■□□□□ 0.4
SQSTM1-211ENST00000506690 SLFN12LQ6IEE8 588 aa17.58■□□□□ 0.4
SQSTM1-211ENST00000506690 C16orf89Q6UX73 402 aa17.58■□□□□ 0.4
SQSTM1-211ENST00000506690 PACS1Q6VY07 963 aa17.58■□□□□ 0.4
SQSTM1-211ENST00000506690 GALNT4Q8N4A0 578 aa17.58■□□□□ 0.4
SQSTM1-211ENST00000506690 SLC7A3Q8WY07 619 aa17.58■□□□□ 0.4
SQSTM1-211ENST00000506690 ATP2A3Q93084 1043 aa17.58■□□□□ 0.4
SQSTM1-211ENST00000506690 PLGRKTQ9HBL7 147 aa17.58■□□□□ 0.4
SQSTM1-211ENST00000506690 COPG2Q9UBF2 871 aa17.58■□□□□ 0.4
SQSTM1-211ENST00000506690 TDRKHQ9Y2W6 561 aaKnown RBP17.58■□□□□ 0.4
SQSTM1-211ENST00000506690 HEMK1Q9Y5R4 338 aaPredicted RBP17.58■□□□□ 0.4
SQSTM1-211ENST00000506690 CCDC130P13994 396 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 CD1EP15812 388 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 PSMC3P17980 439 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 RBL1P28749 1068 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 NUDT2P50583 147 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 CDH6P55285 790 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 PGM5Q15124 567 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 CYP4V2Q6ZWL3 525 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 XYLT1Q86Y38 959 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 SYTL5Q8TDW5 730 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 NLRP7Q8WX94 980 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 DLG3Q92796 817 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 TMIGD2Q96BF3 282 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 LHX5Q9H2C1 402 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 ZNF219Q9P2Y4 722 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 GABBR1Q9UBS5 961 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 BCAP29Q9UHQ4 241 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 FAF1Q9UNN5 650 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 RNF11Q9Y3C5 154 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 AIM2O14862 343 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 KLHL41O60662 606 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 DKC1O60832 514 aaKnown RBP eCLIP17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 RALBP11234 206 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 EIF2AK2P19525 551 aaKnown RBP17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 GLDCP23378 1020 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 PTGER2P43116 358 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 MTA1Q13330 715 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 SLC9B1Q4ZJI4 515 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 PATL1Q86TB9 770 aaKnown RBP17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 DSELQ8IZU8 1212 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 PLD5Q8N7P1 536 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 TMEM102Q8N9M5 508 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 KYQ8NBH2 561 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 KCNN1Q92952 543 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 CDRT15Q96T59 188 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 CCT7Q99832 543 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 MSTO1Q9BUK6 570 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 NIF3L1Q9GZT8 377 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 LIN28AQ9H9Z2 209 aaKnown RBP17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 MAN1C1Q9NR34 630 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 RRN3Q9NYV6 651 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 TUBGCP4Q9UGJ1 667 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 WDR37Q9Y2I8 494 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 SQORQ9Y6N5 450 aa17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 COL2A1P02458 1487 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-211ENST00000506690 ADGRA2Q96PE1 1338 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 KANSL1LA0AUZ9 987 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 BCLAF3A2AJT9 711 aaKnown RBP17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 ADCY6O43306 1168 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 IDO1P14902 403 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 PORP16435 677 aaPredicted RBP17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 ZNF26P17031 533 aaPredicted RBP17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 TXNL4AP83876 142 aaKnown RBP17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 MS4A2Q01362 244 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 INSCQ1MX18 579 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 BNC2Q6ZN30 1099 aaPredicted RBP17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 LPCAT2Q7L5N7 544 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 PODNQ7Z5L7 613 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 MCF2L2Q86YR7 1114 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 RNF157Q96PX1 679 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 TAAR1Q96RJ0 339 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 CPXM1Q96SM3 734 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 CDH19Q9H159 772 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 TDRD3Q9H7E2 651 aaKnown RBP17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 PCDHB12Q9Y5F1 795 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 SIP14410 1827 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 H0YIN7 160 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 BOLA2-SMG1P6H3BVE0 249 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 ALDH1A2O94788 518 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 ZBED1O96006 694 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 ADORA2AP29274 412 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 STT3AP46977 705 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 MYL6P60660 151 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 ILDR2Q71H61 639 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 TRIML2Q8N7C3 387 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 BHLHE22Q8NFJ8 381 aaPredicted RBP17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 CNDP1Q96KN2 507 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 RANBP9Q96S59 729 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 DBNDD1Q9H9R9 158 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 SERPINA10Q9UK55 444 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 CDY2AQ9Y6F7 541 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 CDY1Q9Y6F8 540 aa17.56■□□□□ 0.4
SQSTM1-211ENST00000506690 H0YJX3 145 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 ERBB2P04626 1255 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 NIPAL4Q0D2K0 466 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 SLC10A2Q12908 348 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms