RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 PTGR2Q8N8N7 351 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 TDRD7Q8NHU6 1098 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 SLC2A12Q8TD20 617 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 SNRNP27Q8WVK2 155 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 XAGE5Q8WWM1 108 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 LPIN2Q92539 896 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 FUBP1Q96AE4 644 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 FKBP10Q96AY3 582 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 R3HDM4Q96D70 268 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 RBM17Q96I25 401 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 PGBD1Q96JS3 809 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 PPP1R10Q96QC0 940 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 CHCHD6Q9BRQ6 235 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 XYLT2Q9H1B5 865 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 PDCL3Q9H2J4 239 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 DEF6Q9H4E7 631 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 RMI1Q9H9A7 625 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 KCNK9Q9NPC2 374 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 TBCCD1Q9NVR7 557 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 ORC3Q9UBD5 711 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 CNOT7Q9UIV1 285 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 RAB21Q9UL25 225 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 TRPC5Q9UL62 973 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 HSF4Q9ULV5 492 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 SUFUQ9UMX1 484 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 SLC12A4Q9UP95 1085 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 SH2B3Q9UQQ2 575 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 TCAF1Q9Y4C2 921 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 DISP3Q9P2K9 1392 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 PREX2Q70Z35 1606 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 AGAP5A6NIR3 686 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 M0QYT0 321 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 PEX12O00623 359 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 FIBPO43427 364 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 PRICKLE3O43900 615 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 HEXIM1O94992 359 aaKnown RBP3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 FESP07332 822 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 DLDP09622 509 aaKnown RBP3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 ALADP13716 330 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 CHN1P15882 459 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 GRK5P34947 590 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 PNPLA4P41247 253 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 PAFAH1B1P43034 410 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 RCAN1P53805 252 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 PDE1AP54750 535 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 DCAF7P61962 342 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 TBL3Q12788 808 aaKnown RBP3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 ICAM4Q14773 271 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 PRKD1Q15139 912 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 SLC45A4Q5BKX6 768 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 GPATCH4Q5T3I0 446 aaKnown RBP3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 HAUS3Q68CZ6 603 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 DENND1BQ6P3S1 775 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 VWA1Q6PCB0 445 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 KRBA2Q6ZNG9 492 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 FASTKD5Q7L8L6 764 aaKnown RBP3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 MAVSQ7Z434 540 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 PRRT2Q7Z6L0 340 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 SAMD9LQ8IVG5 1584 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 LNX2Q8N448 690 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 ZNF276Q8N554 614 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 SIRT6Q8N6T7 355 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 TOR1AIP2Q8NFQ8 470 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 LINS1Q8NG48 757 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 PREX1Q8TCU6 1659 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 ADAMTS15Q8TE58 950 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 ADAMTS18Q8TE60 1221 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 SSH3Q8TE77 659 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 TBC1D22AQ8WUA7 517 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 CASKIN1Q8WXD9 1431 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 NPIPB3Q92617 1050 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 CTHRC1Q96CG8 243 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 MYEOVQ96EZ4 313 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 WDYHV1Q96HA8 205 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 APOPT1Q96IL0 206 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 TEPSINQ96N21 525 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 BARD1Q99728 777 aaKnown RBP3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 ADAM2Q99965 735 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 TREX2Q9BQ50 279 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 ALG8Q9BVK2 526 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 TAOK3Q9H2K8 898 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 KLC4Q9NSK0 619 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 PARPBPQ9NWS1 579 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 ITSN2Q9NZM3 1697 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 EHD3Q9NZN3 535 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 MGAT4CQ9UBM8 478 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 MLH3Q9UHC1 1453 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 CCNL1Q9UK58 526 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 GDAQ9Y2T3 454 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 SLC45A1Q9Y2W3 748 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 RPS6KL1Q9Y6S9 549 aa3.57□□□□□ -1.84
TRAPPC11-205ENST00000506426 SPATA31D1Q6ZQQ2 1576 aa3.56□□□□□ -1.84
TRAPPC11-205ENST00000506426 GPATCH8Q9UKJ3 1502 aaKnown RBP3.56□□□□□ -1.84
TRAPPC11-205ENST00000506426 CCDC18Q5T9S5 1454 aa3.56□□□□□ -1.84
TRAPPC11-205ENST00000506426 FYCO1Q9BQS8 1478 aa3.56□□□□□ -1.84
TRAPPC11-205ENST00000506426 NCOA1Q15788 1441 aa3.56□□□□□ -1.84
TRAPPC11-205ENST00000506426 ADGRA2Q96PE1 1338 aa3.56□□□□□ -1.84
TRAPPC11-205ENST00000506426 ZNF335Q9H4Z2 1342 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC11-205ENST00000506426 ZNF644Q9H582 1327 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms