RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 TRMT11Q7Z4G4 463 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 ANKS1BQ7Z6G8 1248 aa17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 KIAA0907Q7Z7F0 614 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 TMEM110Q86TL2 294 aa17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 ADIPOR2Q86V24 386 aa17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 SLC47A2Q86VL8 602 aa17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 CYB5D2Q8WUJ1 264 aa17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 TUBGCP2Q9BSJ2 902 aa17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 NUCKS1Q9H1E3 243 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 NDST4Q9H3R1 872 aa17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 VPS45Q9NRW7 570 aa17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 ELOVL2Q9NXB9 296 aa17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 FHOD1Q9Y613 1164 aa17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 ASCC3Q8N3C0 2202 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 KCNJ18B7U540 433 aa17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 FBXO21O94952 628 aa17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 IGLV3-25P01717 112 aa17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 ERBB2P04626 1255 aa17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 ITPKAP23677 461 aa17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 ERCC5P28715 1186 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 ANP32AP39687 249 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 KLK7P49862 253 aa17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 COPAP53621 1224 aa17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 RPS24P62847 133 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 IRX4P78413 519 aa17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 PTPRNQ16849 979 aa17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 PREPLQ4J6C6 727 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 MPPE1Q53F39 396 aa17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 STPG1Q5TH74 334 aa17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 OTUD1Q5VV17 481 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 RBM43Q6ZSC3 357 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 C11orf57Q6ZUT1 292 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 C12orf50Q8NA57 414 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 C1orf131Q8NDD1 294 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 FAM149B1Q96BN6 582 aa17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 TMA16Q96EY4 203 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 MTG2Q9H4K7 406 aa17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 ABCB8Q9NUT2 735 aa17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 TAB2Q9NYJ8 693 aa17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 INTS6Q9UL03 887 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-215ENST00000506161 TBL1XO60907 577 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 GRAP2O75791 330 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 LATS1O95835 1130 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 CYBBP04839 570 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 PRKCSHP14314 528 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 NUMBP49757 651 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 RING1Q06587 406 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 KCNJ12Q14500 433 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 MEA1Q16626 185 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 TPD52L1Q16890 204 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 PTPN20Q4JDL3 420 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 FSCBQ5H9T9 825 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 MMS22LQ6ZRQ5 1243 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 FAM183BPQ6ZVS7 135 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 CHST9Q7L1S5 443 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 ENOSF1Q7L5Y1 443 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 CYP2U1Q7Z449 544 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 CACUL1Q86Y37 369 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 CFAP52Q8N1V2 620 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 STK32AQ8WU08 396 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 PIGKQ92643 395 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 NAA15Q9BXJ9 866 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 CIPCQ9C0C6 399 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 STIM2Q9P246 746 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 ZMIZ1Q9ULJ6 1067 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 PCDHGC3Q9UN70 934 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 TMEM131Q92545 1883 aa17.39■□□□□ 0.37
PDLIM7-215ENST00000506161 PLXNA2O75051 1894 aa17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 CDX4O14627 284 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 IRAK2O43187 625 aa17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 MOCS2O96007 188 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 TFE3P19532 575 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 IRAK1P51617 712 aa17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 DRAP1Q14919 205 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 ZC3H12AQ5D1E8 599 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 KIAA1324Q6UXG2 1013 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 NUDT18Q6ZVK8 323 aa17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 FAM71AQ8IYT1 594 aa17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 MYO19Q96H55 970 aa17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 SPACA7Q96KW9 195 aa17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 EDEM2Q9BV94 578 aa17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 SLC2A11Q9BYW1 496 aa17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 GGA2Q9UJY4 613 aa17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 TLR6Q9Y2C9 796 aa17.38■□□□□ 0.37
PDLIM7-215ENST00000506161 EPHB6O15197 1021 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 MAP3K13O43283 966 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 MED7O43513 233 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 TRUB2O95900 331 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 PABPC1P11940 636 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 ACADSBP45954 432 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 RPL6Q02878 288 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 LMAN2Q12907 356 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 TCP11X2Q5H9J9 407 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 MS4A13Q5J8X5 152 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 CDKAL1Q5VV42 579 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 OLFML1Q6UWY5 402 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 LPCAT2Q7L5N7 544 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 DEFB106AQ8N104 65 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 SERPINB11Q96P15 392 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms