RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-222	ENST00000506018	IGHV1OR15-9	A0A0B4J2B8	117 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	LNP1	A1A4G5	178 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	MSI1	O43347	362 aa	Known RBP	10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	TSPAN3	O60637	253 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	APOE	P02649	317 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	ATP5B	P06576	529 aa	Known RBP	10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	GNS	P15586	552 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	OXTR	P30559	389 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	USP8	P40818	1118 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	ZNF33A	Q06730	810 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	NNT	Q13423	1086 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	ZNF234	Q14588	700 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	DUOXA1	Q1HG43	343 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	BEND5	Q7L4P6	421 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	METTL3	Q86U44	580 aa	Known RBP	10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	PRCC	Q92733	491 aa	Predicted RBP	10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	MRGPRX1	Q96LB2	322 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	KREMEN1	Q96MU8	473 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	LSM14B	Q9BX40	385 aa	Known RBP	10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	TSPY26P	Q9H489	355 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	THAP9	Q9H5L6	903 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	FBRS	Q9HAH7	460 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	RXFP3	Q9NSD7	469 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	SLC12A6	Q9UHW9	1150 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	MBD1	Q9UIS9	605 aa	Predicted RBP	10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	HCN2	Q9UL51	889 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	CYP8B1	Q9UNU6	501 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	TLR6	Q9Y2C9	796 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	CEP83	Q9Y592	693 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	RAD54B	Q9Y620	910 aa		10.84	□□□□□ -0.67
NR1I3-222	ENST00000506018	ADAMTS9	Q9P2N4	1935 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	C4orf47	A7E2U8	309 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	ACSL4	O60488	711 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	CFI	P05156	583 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	EPHX1	P07099	455 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	POLR2E	P19388	210 aa	Known RBP	10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	HOXD9	P28356	352 aa	Predicted RBP	10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	CD6	P30203	668 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	IL12RB1	P42701	662 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	PTGER3	P43115	390 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	GPD2	P43304	727 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	PTK2	Q05397	1052 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	GFPT1	Q06210	699 aa	Predicted RBP	10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	TYRO3	Q06418	890 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	ENPP2	Q13822	863 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	MAN2A1	Q16706	1144 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	ARHGAP44	Q17R89	818 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	FUT11	Q495W5	492 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	FNDC3B	Q53EP0	1204 aa	Known RBP	10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	WDR45B	Q5MNZ6	344 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	KIAA1211L	Q6NV74	962 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	SLC23A3	Q6PIS1	610 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	CHST9	Q7L1S5	443 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	MFN1	Q8IWA4	741 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	SCUBE3	Q8IX30	993 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	RGL4	Q8IZJ4	473 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	HDDC3	Q8N4P3	179 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	FRMD1	Q8N878	549 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	HJURP	Q8NCD3	748 aa	Predicted RBP	10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	ZNF606	Q8WXB4	792 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	SIPA1	Q96FS4	1042 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	ZSWIM1	Q9BR11	485 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	CRACR2A	Q9BSW2	395 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	POPDC2	Q9HBU9	364 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	GGA2	Q9UJY4	613 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	PILRB	Q9UKJ0	227 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	SLC6A14	Q9UN76	642 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	NCOR2	Q9Y618	2525 aa		10.83	□□□□□ -0.68
NR1I3-222	ENST00000506018	WASH3P	C4AMC7	463 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	PES1	O00541	588 aa	Known RBP	10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	TBL1X	O60907	577 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	MOCS3	O95396	460 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	IGLV3-27	P01718	113 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	SYP	P08247	313 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	SLC2A3	P11169	496 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	PABPC1	P11940	636 aa	Known RBP	10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	ITPKA	P23677	461 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	ERCC5	P28715	1186 aa	Predicted RBP	10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	KRT9	P35527	623 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	RPL34	P49207	117 aa	Known RBP	10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	BPIFB4	P59827	614 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	ST8SIA6	P61647	398 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	YWHAZ	P63104	245 aa	Known RBP	10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	IRX4	P78413	519 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	MTA1	Q13330	715 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	CDH18	Q13634	790 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	PIK3R6	Q5UE93	754 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	TMPRSS6	Q8IU80	811 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	DQX1	Q8TE96	717 aa	Known RBP	10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	CLEC4C	Q8WTT0	213 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	ERLEC1	Q96DZ1	483 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	HSPA12B	Q96MM6	686 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	SLC4A5	Q9BY07	1137 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	SLC32A1	Q9H598	525 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	SYNC	Q9H7C4	482 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	CD248	Q9HCU0	757 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	ABCB8	Q9NUT2	735 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	TJP2	Q9UDY2	1190 aa		10.82	□□□□□ -0.68
NR1I3-222	ENST00000506018	SUN2	Q9UH99	717 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms